Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02520 ATGAATAGAGGAGTTGTTCATGGGTCGCCGGTGCAACAAATGATGGCGGCCGGAAACCCTAATTGGTGGAACATCAATAGCATGAGGCCTCCACCTCTTCCACAAGCTCCTCCTTTCTTGTCTACAACTCCTAATTCTTCAAACTTTCTCACCCAATATTCTTCTTCTTCCTCCTCTCTTCCTTTGCCTCCTTCTTGGCATGAAAATCAAGAGCTTCCTGAGTCATGGAGCCAGCTACTCATGGGTGGACTTGTGGGTGAAGAAGATCATCATCAAATGCTAAGTCATCATCAAGGTGCAAATAACAATGCTTCTCTTGTTGATGTTAAGCAAGAAAGCTCAGTTAACAGCTATGTATATGGCCATGGTGGTGCAAATGAAGAACTTCAGCCATCAAAGACTGCATCTTGGTCTCCAAATTCATGTGTCACAAGCTTCAGCAGCAACATGCTTGATTTTTCAAGCAATAACAATAGTGATCATAAGACTAATATTGATGCAAGGCATCCTCCACCACCACCACCAGATCGATCATCTGAGTGTAACAGCAGTGGAAGTGGTGGGGCAGTGAAGAAAGCTAGGGTTCAACCTTCCACAACTACTCAATCCACTTTCAAGGTCAGGAAGGAGAAGTTAGGTGACAGAATTACTGCACTTCATCAGCTGGTTTCCCCATTTGGGAAGACTGACACAGCCTCAGTGTTGTTAGAAGCTATCGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCTCTTAGTTTACCATACTTGAGCAATGGATCAGGGAACACAAGGCATCAACAACATTCTGGAGAGAAAAATTGTTTATTCCCTGAAGACCCCGGTCAGCTACTGCATGAAAACTGCTTGAAGAGGAAAGCACCTACTAGTGAACAGGATTCTAAAGAAGAGACTAAGAAGGACCTAAGGAGTAGAGGGTTGTGTTTGGTTCCGGTTTCATGCACACTTCAAGTTGGAAGTGACAACGGTGCTGATTATTGGGCTCCAGCACTTGGTGGCGGTTTTCGGTAG 1032 0.4457 MNRGVVHGSPVQQMMAAGNPNWWNINSMRPPPLPQAPPFLSTTPNSSNFLTQYSSSSSSLPLPPSWHENQELPESWSQLLMGGLVGEEDHHQMLSHHQGANNNASLVDVKQESSVNSYVYGHGGANEELQPSKTASWSPNSCVTSFSSNMLDFSSNNNSDHKTNIDARHPPPPPPDRSSECNSSGSGGAVKKARVQPSTTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLSNGSGNTRHQQHSGEKNCLFPEDPGQLLHENCLKRKAPTSEQDSKEETKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02520 343 MobiDBLite consensus disorder prediction 40 56 - -
Adu05g02520 343 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 17 329 - -
Adu05g02520 343 MobiDBLite consensus disorder prediction 34 56 - -
Adu05g02520 343 Gene3D - 201 257 IPR036638 GO:0046983
Adu05g02520 343 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 206 257 IPR036638 GO:0046983
Adu05g02520 343 MobiDBLite consensus disorder prediction 153 207 - -
Adu05g02520 343 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 196 245 IPR011598 GO:0046983
Adu05g02520 343 PANTHER OS05G0228400 PROTEIN 17 329 - -
Adu05g02520 343 CDD bHLH_AtbHLH_like 204 253 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02520 Adu-Chr5 90669079 90673793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02520 1 284 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 45.892 1.41e-68 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02520 - - gmx:100785156 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g02520 05 90669079 90673793 Adu05g02520 05 90669079 90673793 ECH
Adu03g01910 03 33789442 33792440 Adu05g02520 05 90669079 90673793 PCT