Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02512 ATGGATTTGCTTGGGCTTAGTCTTGAGGATCCCTTTGTGTATTGTGGAAGGAAGTTCTCATTGAAGACAGTATTGATGTTGGCTGATCAAATGATGACTAGAATAGAATATGTGCATTCCAAAGGTTTTCTACATAGAGATATAAAGCCTGACAACTTCCTCATGGGACTTGGTCGGAAAGCAAACCAGGTTTACATAATTGATTTTGGGCTTGCAAAACGATATCGGGACTCTACAACCAATCGCCACATCCCTTACAGGGAGAACAAAAACTTAACGGGGACTGCACGCTATGCAAGTTGCAATACACATCTTGGGATTGAGCAAAGTCGGCGGGATGATTTGGAGTCATTGGGATATGTGCTTCTCTACTTTCTCAGAGGAAGCCTTCCTTGGCAAGGTCTAAAGGCTGCAACAAAGAAGCAGAAGTATGACAAAATATGTGAGAAGAAAGTGTCAACCCCTATTGAGGTTCTTTGCAAATCTCATCCTGTAGAGTTTGCTTCATACTTCCATTACTGCCACTCTCTGACCTTTGATCAGCGACCTGACTATGGATTCTTGAAGCGCCTATTTCGGGAACAATTTGCTCGGGAAGGGTTTGAATTTGATTATGTGTTTGATTGGACTATTTTAAAGTACCAGCAGGCACAAAAGAATAGAGTCCAGGCTCACTCATCTGTGGTCCCGGGAGCAAGCAACAGTCGTGCAACACCAATGGACTTTGACAACCATCGAGGTGATGCTACAGAGCACATTAAATCAGGCAATGCCACTGGCTCTGGTGTTAAATTTCAGTTTAAACCACCTGCTGTTAAAAATCCACTCGACAAGAATGACAAGAATATTTTTGGTGAAGCAAATATACCCTCTACTTCCCATTCTCATGCTGGTCCTTCAAAAAGGAACTCCTTGAAGCCTGCTCCGTCCTCCGATGCTGTTAACCCTGGCCATGGGCAAGGCAGTAAAGTTGGCCCTTCAAGTAGCTGGATTTCATCTCTGCATCGCATATCATCTGCCAAATGA 1026 0.4366 MDLLGLSLEDPFVYCGRKFSLKTVLMLADQMMTRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFREQFAREGFEFDYVFDWTILKYQQAQKNRVQAHSSVVPGASNSRATPMDFDNHRGDATEHIKSGNATGSGVKFQFKPPAVKNPLDKNDKNIFGEANIPSTSHSHAGPSKRNSLKPAPSSDAVNPGHGQGSKVGPSSSWISSLHRISSAK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02512 341 SUPERFAMILY Protein kinase-like (PK-like) 1 209 IPR011009 -
Adu05g02512 341 SMART serkin_6 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02512 341 Gene3D Transferase(Phosphotransferase) domain 1 1 256 - -
Adu05g02512 341 ProSiteProfiles Protein kinase domain profile. 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02512 341 Pfam Protein kinase domain 18 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02512 341 MobiDBLite consensus disorder prediction 225 341 - -
Adu05g02512 341 MobiDBLite consensus disorder prediction 225 240 - -
Adu05g02512 341 PANTHER CASEIN KINASE 1-LIKE PROTEIN 3 1 324 - -
Adu05g02512 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Adu05g02512 341 PANTHER CASEIN KINASE-RELATED 1 324 - -
Adu05g02512 341 MobiDBLite consensus disorder prediction 285 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02512 Adu-Chr5 90470739 90474812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02512 19 201 MAP Kinase Kinase Kinase AT1G62400 28.108 1.94e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Adu05g02512 Pkinase 6.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02512 K08960 - gmx:100798768 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g02512 05 90470739 90474812 Adu05g02512 05 90470739 90474812 ECH