Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02481 ATGGCCGATGAAGTTTCCTTTGTCGGGAACGAAGAAGAACTGGTTTCCGATGAGCCATATGTTTGTGTAGGCGATGAACCTTCATCAGAGGCAAGTGAAGATGCGAATATGGACGGGTATTGTGGCTATAATGATGGTGATGATTTTTACGAAAGCTGGGAAGACAGAGGCATTGATGGGATTGCTGACTTTGGCCGAATTAACTTTAAAGAAATAAGTTTTGATGAGATGAGATTGCTACATTTTCCCGATCGACATGTAGCTTTTGCTTTCTACAATTTATATGCAAAAATGAATGGGTTCGCCGCAAGGAAGACCAGGCTAAGGCGAAATGCCAAGAAACTGGCGACACAACAGCAGTTTGTTTGCTTTAGGCAGGGGTTCAGAGAATTTGCCGCGGATAAGGAGGCATACGAACGTAAGCGGGAGCCTAAGCCTGAGACTAGATGTGGCTGTTTGGCGCAGATGCGTGTTCATCTACATTTGGAGAGTGGTAGATGGATTATTTCATACTTTGATAATGTTCACAACCATGAGATGCTCGATGGAACACTTACATTTATGCTCCCTGGTCATAGGAAGATGAATTCTACCGCAATTGAACAAATGAACATGATGTTGAGAGTCGGGATTAAAACACCACAGATATATTCAGCATTTGTGCATACTGCAGGGGGCTTCCAAAATGTACCATTTTTGAAGAGAGACATGTACAACCAGATTGATAAACAGAGAAAGCTAATAGGGGGCGATGCGGTGTCTTGTCTTCGGTGGTTGGAATCATATGCAGAGGAGAATCCTGGAACGTGGGAGAGATTGGTCACTGAGCTTCAGCTTCAGGATAATCAGTGGGTCTGTGACCTTTATGATCGGAGGAAAATGTGGGCAACGGCTCACATTCATGGCCACTTTTTCGGTGGATTTCGGACGACATCAAGATGCGAGGGTTTGCATTCGATGCTTGGTAAGTTTGTCCACTCCCGCCATAATTTGAGGAACTTTGTTGAACAATATTTTCGCTGTGTATCGGAGATGAGATCTCGGGAAGCACAATCCGATATGCATAGCGTGGTTGGACACTTGGTGTTGCAAAGTCCGTTACATGATTTGGAAAGGTCTGCTGCAAAGTTACTAACGAGGGAGATATTTATCTTGTTTCGGCCCATGCTGTCCCGTGCATGTACATTAAAGGTCCGGTCTTGTACATTGACTCCGACATCGGACATATACACCATTTCACGGTGGGGCAATTCACACAACTACTGGCATGTTTCGCACTATCCCGAGGATTCAATAtttaaatgctcttgtttaaggatggaatcccttggaataccatgcgatcacattgtagctcttcttgtacatcttgatttcacggaaatcccaacaagtcttgttttggagaggtggtctaagaacgctcggtcgaagatGAGGCAATATGTTGAGAAGGGACCGTTTAGCTGGGACTCTATGGTAAGTTGTCGCAATTGGATGCTGAACGACCTATGTAGGGAGATGTGTGTGCTTGCTTCAGTGAGGGAGGATAAATTTGAAACAATGACTGAGAAGATACGCAGTGAGATCAATCGATTAAAGCATGACACCGAAGCTGGGCCTTCGACACCCGCGGTTGTTGGCCAATCATCCACACTCGAGGGGTGCGTTCAAAACCCACTTGTTGTGCGTCGCAAGAAGAGGCCAAAGAGGGACTCAGTTAACCGTACCTTGGTTAGGGGCGTGAGACGGTGCAGCATTTGTCATCGGGTTGGGCATAATCGAACTTCTTGCCAGTCAAATGTTCGGCAGGGCCAGCGGCAGCAGCCTAGCCACGAGGAAGACGTCGATGAAGATAACTACTACACTCCTAACTTTGGGGAGGAAGTTGATGAGTATGCTCATTATCATTCTCAACCCGTGGGGCAAGAGGAACACTTTGGCCGGTATGAAGAGGAGTTCCAAGTGCCATTGACGGATCCTTATTATAGTTGGCATGAGTAG 2004 0.4296 MADEVSFVGNEEELVSDEPYVCVGDEPSSEASEDANMDGYCGYNDGDDFYESWEDRGIDGIADFGRINFKEISFDEMRLLHFPDRHVAFAFYNLYAKMNGFAARKTRLRRNAKKLATQQQFVCFRQGFREFAADKEAYERKREPKPETRCGCLAQMRVHLHLESGRWIISYFDNVHNHEMLDGTLTFMLPGHRKMNSTAIEQMNMMLRVGIKTPQIYSAFVHTAGGFQNVPFLKRDMYNQIDKQRKLIGGDAVSCLRWLESYAEENPGTWERLVTELQLQDNQWVCDLYDRRKMWATAHIHGHFFGGFRTTSRCEGLHSMLGKFVHSRHNLRNFVEQYFRCVSEMRSREAQSDMHSVVGHLVLQSPLHDLERSAAKLLTREIFILFRPMLSRACTLKVRSCTLTPTSDIYTISRWGNSHNYWHVSHYPEDSIFKCSCLRMESLGIPCDHIVALLVHLDFTEIPTSLVLERWSKNARSKMRQYVEKGPFSWDSMVSCRNWMLNDLCREMCVLASVREDKFETMTEKIRSEINRLKHDTEAGPSTPAVVGQSSTLEGCVQNPLVVRRKKRPKRDSVNRTLVRGVRRCSICHRVGHNRTSCQSNVRQGQRQQPSHEEDVDEDNYYTPNFGEEVDEYAHYHSQPVGQEEHFGRYEEEFQVPLTDPYYSWHE 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02481 667 Pfam SWIM zinc finger 435 457 IPR007527 GO:0008270
Adu05g02481 667 Pfam FAR1 DNA-binding domain 91 181 IPR004330 -
Adu05g02481 667 SMART 26again6 433 460 IPR006564 GO:0008270
Adu05g02481 667 ProSiteProfiles Zinc finger SWIM-type profile. 422 458 IPR007527 GO:0008270
Adu05g02481 667 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 261 478 - -
Adu05g02481 667 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 59 268 - -
Adu05g02481 667 MobiDBLite consensus disorder prediction 598 620 - -
Adu05g02481 667 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 261 478 IPR031052 GO:0006355
Adu05g02481 667 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 59 268 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02481 Adu-Chr5 89783015 89785574 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu05g02481 FAR1 1.2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02481 - - ahf:112717731 481.87