Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02479 ATGAGATTCTCAGGAATAGTAAACCTCACTTACCACATAAGAATTTTCACTTTCCCCTTTGCCACCGCAGCTGCCCCTCCTCCTCTACTACCAGCGCCTCCTCCTGATGATGACGAGGGTGTTGGGACTTCACTTACCACCGCACCATCCCATTGGCAAAAGGCTAAGCTGCGGAGGAGGATGAGCCTTCAACGCTGCCACCAGAACCCTAATTTCACAGCCGCAGGAGCTTCCACAATGACTTTCAAGCGCAGAAATGGCGGAAGAAACAAGCATGGCCGCGGCCACGTCAAATTCATCCGCTGTTCCAACTGCGGCAAGTGCTGCCCTAAGGACAAATCGATCAAGCGGTTCCTTGTGAGGAACATTGTTGAGCAAGCTGCAGTTCGTGATGTTCAGGAAGCCTGCGTCTATGAGCAATACACTCTTCCGAAGTTGTACGTGAAGATGCAGTATTGTGTTTCCTGTGCCATCCACTCTCATGTCGTGAGGGTGCGTTCTCGCACCGATAGGAGGAACCGCGAGCCGCCACAGCGCTTTGCCAGGCGTAGGGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCACCCCGTCCTGCTGGTGGAGTAGGAGCTGCCCCTAGAGCTTAA 630 0.5397 MRFSGIVNLTYHIRIFTFPFATAAAPPPLLPAPPPDDDEGVGTSLTTAPSHWQKAKLRRRMSLQRCHQNPNFTAAGASTMTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFARRRDDAPRPGQPGQAPRPAGGVGAAPRA 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02479 209 PANTHER 40S RIBOSOMAL PROTEIN S26 80 206 - -
Adu05g02479 209 ProSitePatterns Ribosomal protein S26e signature. 152 159 IPR000892 GO:0003735|GO:0005840|GO:0006412
Adu05g02479 209 MobiDBLite consensus disorder prediction 168 189 - -
Adu05g02479 209 MobiDBLite consensus disorder prediction 29 49 - -
Adu05g02479 209 Gene3D Ribosomal protein S26e 80 193 IPR038551 -
Adu05g02479 209 PANTHER 40S RIBOSOMAL PROTEIN S26 80 206 IPR000892 GO:0003735|GO:0005840|GO:0006412
Adu05g02479 209 MobiDBLite consensus disorder prediction 164 209 - -
Adu05g02479 209 Pfam Ribosomal protein S26e 80 185 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02479 Adu-Chr5 89763207 89769206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02479 80 195 Cytoplasmic Ribosomal Protein Gene Family AT3G56340 84.483 4.86e-69 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02479 K02976 - gmx:100499862 196.823