Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02473 ATGCTTGAGAATATCTTAACATTCGAAACGGCTTGGTTTGATGAAGAAAATAACTCCAGTGGAGCATTGTGCTCAAGGCTAAGCAATGAGGCTTCCATGGTTAAGTCCCTTGTCGCGGATCGCGTTTCATTGCTGGTTCAAACAGCTTCTGCTGTCAGCATTGCAATGATCATAGGACTCGCCGTGGCGTGGAAGCTCGCTCTTGGGATGATAGCAGTGCACCCACTCACAATCCTCTGCTTCTACACAAGAAAAGTTCTTCTCTCTACACTCTCATCAAAATTCATCAAGGCACAGAATCATAGCACACAGATTGCAGTTGAAGCAGTGTACAACCACAGAATTGTGACTTCATTTGGAAGCATACAAAAGGTTTTGACATTATTCGATGAAGCGCAGGAGGCGCCAAGGAAGGAGGCGAGGAAGAAGTCGTGGCTGGCCGGGATTGGAATGGGGTCTGCTCAATGCCTAACATTCATGACATGGGCTTTGGATTTCTGGTATGGAGGGACATTGGTGGAGAAGAAGGATATTTCTGCAGGGGATGTGTTTAAGACATTCTTTGTTTTGGTTAGCACTGGGAAGGTCATTGCTGAAGCTGGAAGCATGACTTCTGATCTTGCAAAGTCCTCAACTGCTGTCAAATCTGTTTTTGAGATTCTTGACAGGAAATCACTTATTCCCAAGGCTGGTGATTGCAACAATGGAAGAAAGTTGGAAAATATGAGTGGGAAGATAGAACTAAAGAACGTTGATTTCGCCTACCCAAGTAGGGCAGGGACACCGATATTGCGCAAGTTTTGCTTGGAGGTGAAGGCAGGGAAGAGTATTGGGTTAGTTGGGAAGAGTGGTTGTGGAAAATCAACAGTGATTGCATTGATCCAAAGATTCTATGATGTTGAGAGAGGGTTTGTGAAAATGGACAATGTGGACATAAGGGAACTAGATATTCAATGGTATAGGCAGCACACTGCACTTGTTAGCCAAGAACCTGTCATATATTCTGGCACTGTAAGGGATAACATCTTGTTTGGGAAGCAAGATGCAACTGAGAATGAAGTTGTTGAGGCTGCAAAAGCCGCAAATGCTCATGAGTTCATATCATCATTGAAAGATGGATATGAAACAGAATGTGGAGAAAGGGGAGTGCAACTATCTGGAGGGCAAAAGCAGAGAATAGCAATAGCAAGGGCCATAATAAGGAACCCAACAATATTGCTGCTTGACGAAGCAACAAGTGCACTTGATGTTCAATCAGAACAAGTTGTGCAAGAAGCATTAGACAGGATCATGGTGGGAAGAACCACCATTGTTGTAGCACATAGGCTCAACACCATCAAAGAACTTGACTCGATTGCATATGTCTCAGAGGGTAAGGTTCTTGAGCAAGGAACCTATGCTCAACTTAGGCACAAGAGAGGTGCCTTCTTCAATCTTGCATGCCATCAAATCCAAAATTAG 1461 0.4401 MLENILTFETAWFDEENNSSGALCSRLSNEASMVKSLVADRVSLLVQTASAVSIAMIIGLAVAWKLALGMIAVHPLTILCFYTRKVLLSTLSSKFIKAQNHSTQIAVEAVYNHRIVTSFGSIQKVLTLFDEAQEAPRKEARKKSWLAGIGMGSAQCLTFMTWALDFWYGGTLVEKKDISAGDVFKTFFVLVSTGKVIAEAGSMTSDLAKSSTAVKSVFEILDRKSLIPKAGDCNNGRKLENMSGKIELKNVDFAYPSRAGTPILRKFCLEVKAGKSIGLVGKSGCGKSTVIALIQRFYDVERGFVKMDNVDIRELDIQWYRQHTALVSQEPVIYSGTVRDNILFGKQDATENEVVEAAKAANAHEFISSLKDGYETECGERGVQLSGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNTIKELDSIAYVSEGKVLEQGTYAQLRHKRGAFFNLACHQIQN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02473 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 236 483 IPR027417 -
Adu05g02473 486 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 209 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu05g02473 486 Pfam ABC transporter transmembrane region 1 192 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu05g02473 486 CDD ABC_6TM_Pgp_ABCB1_D2_like 1 227 - -
Adu05g02473 486 Gene3D - 244 483 IPR027417 -
Adu05g02473 486 SUPERFAMILY ABC transporter transmembrane region 1 223 IPR036640 GO:0005524|GO:0016021
Adu05g02473 486 Pfam ABC transporter 267 413 IPR003439 GO:0005524
Adu05g02473 486 ProSitePatterns ABC transporters family signature. 385 399 IPR017871 GO:0005524
Adu05g02473 486 CDD ABC_MTABC3_MDL1_MDL2 246 480 - -
Adu05g02473 486 Gene3D ABC transporter type 1, transmembrane domain 99 243 IPR036640 GO:0005524|GO:0016021
Adu05g02473 486 SMART AAA_5 273 465 IPR003593 -
Adu05g02473 486 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 246 482 IPR003439 GO:0005524
Adu05g02473 486 PANTHER ABC TRANSPORTER B FAMILY MEMBER 8-RELATED 1 483 - -
Adu05g02473 486 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 483 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02473 Adu-Chr5 89670639 89672276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02473 1 476 Calmodulin-binding Proteins AT2G36910 43.515 1.25e-124 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02473 K05658 - gmx:100801088 847.425