Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02470 ATGGGTTCACCCCCAAAGAATAAGGGAGAGAGGAAAATAGAGAGAGGTTCTATAGCTATAATCTTGAGATATGCAGATTGTGTTGATGTTTTGCTTATGTTAATGGGTGCTGTTGGAGCAGTTGGAGATGGCATGTCCACAAACATTCTTCTCATCTTCGCTAGCCGCATCATGAACAGCTTAGGATATGGCAACCAACAACAACAACAACAAAGTAGTGGCACTGCCAACAATTACATGTCCCAGGTTGAAAAGTGCAGCTTGTATTTTGTGTACTTGGGACTAGCAGTGATGCTGTTGGCCTTCATGGAAGGGTACTGTTGGAGTAAAACAAGTGAGAGGCAGGTGTTGAGAATTCGGTACAAGTATTTGGAAGCTGTTCTAAGACAAGAAGTGGGGTTTTTTGAATCACAAGAAGCAACTACTTCTGAAATCATCAATTCCATATCAAAGGACACTTCTCTCCTCCAAGAAGTCCTAAGTGAAAAGGTTCAACTTCATTTTAACACACTCTTCTTTATCAAAAGTACGAAATCCCTTGGAGTGGTACTTCCAGATTTGAAGTACTTGACAGAAGCATCAGTAGCATCCACAAGAATCTTTAACATGATTGACAGAAAAGCAGTAATTGACGGTGAAGACACAACAAAGGGAATAGTGCTAGACCAAATTAACGGGAACCTAGACTTTGAACATGTGAAATTCACATATCGTTCAAGACCAGACAACCTCGTACTCAATGACTTCAATCTGAGGGTTGAATCAGGTAAAACGGTTGCACTTGTTGGTGCAAGTGGGAGTGGAAAGTCAACGGCAATAGCGTTGGTGCAAAGGTTCTATGATGTGGATGAAGGTGTTGTGAGGGTTGATGGTGTTGACATAAAGAGGTTGCAGTTGAAGTGGTTGAGGGGTAAAATGGGGCTTGTGAGTCAAGAACATGCATTGTTTGGGACATCTATTAAGGAGAATATTATGTTTGGAAAGCTTGATGCTACCATGGATGAGGTTGTTGCTGCTGCTACTGCTGCTAATGCTCATAACTTTGTTAGGCAGCTCCCTCAGGGTTATGAAACCAAGATTGGAGAAAGGGGAGCACTTCTTTCAGGAGGACAAAAGCAGCGAATAGCAATTGCAAGAGCCATCATAAAGAATCCGGTGATTCTTCTTCTTGATGAAGCAACCAGTGCTCTTGACTCTGAATCTGAATTACTTGTCCAAAATGCCCTTGATCATGCCTCATTGGGCAGGACTACATTGGTTGTTGCACACAAGCTATCAACTGTCCGAAATGCAGATGTCATAGCCGTTGTCAACGCCGGTTCCATCATCGAAATCGGCACGCACAACGAGCTCATAACCCATCCAAACGGCCAATATGCAAAGCTAGCAAAACTCCAAACACAACTCAGCTTTGATGATCAACAAGAAATATCCAATGCTCTTTCTTCTGCAGCAAGAAGCAGTGCTGGTAGAACCAGCACAGCAAGATCAACAAGCCCTGCAATTTTCCAAAAATCACCAATCCCTATTGATGATAACACCATAAACCCGGAATCATCTCTTGTTTCTCACCCTTCACCTTCTTTTCCAAGGCTTCTATCTCTGAATGCACCTGAATGGAAACAATGTTTAATTGGTACTTTTTCCGCAATAGCTTTCGGCTCAGTGCAGCCCATATATGCCTTAACAATTGGTGGCATGATTTCTGCATTTTTCGCCGAAAGCCATAGTGAAATGATTCACAGAATCAGGACTTACTCTTTGATTTTCACTTCTCTTTCTCTTGCTTCCATCACACTCAACCTCTTGCAGCACTACAATTTCGCATACATGGGAGCAAGATTAACAAAAAGGATACGGCAGAGAATGCTTGAGAATATCTTAACATTCGAAACGGCTTGGTTTGATGAAGAAAATAATTCCAGTGGAGCATTGTGCTCGAGGCTAAGCAATGAGGCTTCCATGGTTAAGTCCCTTGTCGCGGATCGCGTTTCATTGCTGGTTCAAACAGCTTCTGCTGTCAGCATTGCAATGATCATAGGACTCGCCGTGGCGTGGAAGCTCGCTCTTGGGATGATAGCAGTGCACCCACTCACAATCCTCTGCTTCTACACAAGAAAAGTTCTTCTCTCTACACTCTCATCAAAATTCATCAAGGCACAGAATCATAGCACACAGATTGCAGTTGAAGCAGTGTACAACCACAGAATTGTGACTTCATTTGGAAGCATACAAAAGGTTTTGACATTATTCGATGAAGCGCAGGAGGCGCCAAGGAAGGAGGCGAGGAAGAAGTCGTGGCTGGCCGGGATTGGAATGGGGTCTGCTCAATGCCTAACATTCATGACATGGGCTTTGGATTTCTGGTATGGAGGGACATTGGTGGAGAAGAAGGATATTTCTGCAGGGGATGTGTTTAAGACATTCTTTGTTTTGGTTAGCACTGGGAAGGTCATTGCTGAAGCTGGAAGCATGACTTCTGATCTTGCAAAGTCCTCAACTGCTGTCAAATCTGTTTTTGAGATTCTTGACAGGAAATCACTTATTCCCAAGGCTGGTGATTGCAACAATGGAAGAAAGTTGGAAAATATGAGTGGGAAGATAGAACTAAAGAACGTTGATTTCGCCTACCCAAGTAGGGCAGGGACACCGATATTGCGCAAGTTTTGCTTGGAGGTGAAGGCAGGGAAGAGTATTGGGTTAGTTGGGAAGAGTGGTTGTGGAAAATCAACAGTGATTGCATTGATCCAAAGATTCTATGATGTTGAGAGAGGGTTTGTGAAAATGGACAATGTGGACATAAGGGAACTAGATATTCAATGGTATAGGCAGCACACTGCACTTGTTAGCCAAGAACCTGTCATATATTCTGGCACTGTAAGGGATAACATCTTGTTTGGGAAGCAAGATGCAACTGAGAATGAAGTTGTTGAGGCTGCAAAAGCCGCAAATGCTCATGAGTTCATATCATCATTGAAAGATGGATATGAAACAGAATGTGGAGAAAGGGGAGTGCAACTATCTGGAGGGCAAAAGCAGAGAATAGCAATAGCAAGGGCCATAATAAGGAACCCAACAATATTGCTGCTTGACGAAGCAACAAGTGCACTTGATGTTCAATCAGAACAAGTTGTGCAAGAAGCATTAGACAGGATCATGGTGGGAAGAACCACCATTGTTGTAGCACATAGGCTCAACACCATCAAAGAACTTGACTCGATTGCATATGTCTCAGAGGGTAAGGTTCTTGAGCAAGGAACCTATGCTCAACTTAGGCACAAGAGAGGTGCCTTCTTCAATCTTGCATGCCATCAAATCCAAAATTAG 3327 0.431 MGSPPKNKGERKIERGSIAIILRYADCVDVLLMLMGAVGAVGDGMSTNILLIFASRIMNSLGYGNQQQQQQSSGTANNYMSQVEKCSLYFVYLGLAVMLLAFMEGYCWSKTSERQVLRIRYKYLEAVLRQEVGFFESQEATTSEIINSISKDTSLLQEVLSEKVQLHFNTLFFIKSTKSLGVVLPDLKYLTEASVASTRIFNMIDRKAVIDGEDTTKGIVLDQINGNLDFEHVKFTYRSRPDNLVLNDFNLRVESGKTVALVGASGSGKSTAIALVQRFYDVDEGVVRVDGVDIKRLQLKWLRGKMGLVSQEHALFGTSIKENIMFGKLDATMDEVVAAATAANAHNFVRQLPQGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESELLVQNALDHASLGRTTLVVAHKLSTVRNADVIAVVNAGSIIEIGTHNELITHPNGQYAKLAKLQTQLSFDDQQEISNALSSAARSSAGRTSTARSTSPAIFQKSPIPIDDNTINPESSLVSHPSPSFPRLLSLNAPEWKQCLIGTFSAIAFGSVQPIYALTIGGMISAFFAESHSEMIHRIRTYSLIFTSLSLASITLNLLQHYNFAYMGARLTKRIRQRMLENILTFETAWFDEENNSSGALCSRLSNEASMVKSLVADRVSLLVQTASAVSIAMIIGLAVAWKLALGMIAVHPLTILCFYTRKVLLSTLSSKFIKAQNHSTQIAVEAVYNHRIVTSFGSIQKVLTLFDEAQEAPRKEARKKSWLAGIGMGSAQCLTFMTWALDFWYGGTLVEKKDISAGDVFKTFFVLVSTGKVIAEAGSMTSDLAKSSTAVKSVFEILDRKSLIPKAGDCNNGRKLENMSGKIELKNVDFAYPSRAGTPILRKFCLEVKAGKSIGLVGKSGCGKSTVIALIQRFYDVERGFVKMDNVDIRELDIQWYRQHTALVSQEPVIYSGTVRDNILFGKQDATENEVVEAAKAANAHEFISSLKDGYETECGERGVQLSGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNTIKELDSIAYVSEGKVLEQGTYAQLRHKRGAFFNLACHQIQN 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02470 1108 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 219 466 IPR027417 -
Adu05g02470 1108 Gene3D ABC transporter type 1, transmembrane domain 510 852 IPR036640 GO:0005524|GO:0016021
Adu05g02470 1108 Gene3D ABC transporter type 1, transmembrane domain 13 176 IPR036640 GO:0005524|GO:0016021
Adu05g02470 1108 SMART AAA_5 895 1087 IPR003593 -
Adu05g02470 1108 SMART AAA_5 255 481 IPR003593 -
Adu05g02470 1108 CDD ABC_MTABC3_MDL1_MDL2 868 1102 - -
Adu05g02470 1108 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 19 167 IPR039421 -
Adu05g02470 1108 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 171 1105 IPR039421 -
Adu05g02470 1108 Gene3D - 219 483 IPR027417 -
Adu05g02470 1108 CDD ABC_MTABC3_MDL1_MDL2 229 466 - -
Adu05g02470 1108 SUPERFAMILY ABC transporter transmembrane region 527 845 IPR036640 GO:0005524|GO:0016021
Adu05g02470 1108 ProSitePatterns ABC transporters family signature. 1007 1021 IPR017871 GO:0005524
Adu05g02470 1108 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 544 831 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu05g02470 1108 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 34 174 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu05g02470 1108 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 858 1105 IPR027417 -
Adu05g02470 1108 CDD ABC_6TM_Pgp_ABCB1_D2_like 533 849 - -
Adu05g02470 1108 ProSitePatterns ABC transporters family signature. 367 381 IPR017871 GO:0005524
Adu05g02470 1108 SUPERFAMILY ABC transporter transmembrane region 21 174 IPR036640 GO:0005524|GO:0016021
Adu05g02470 1108 Pfam ABC transporter 246 395 IPR003439 GO:0005524
Adu05g02470 1108 Pfam ABC transporter 889 1035 IPR003439 GO:0005524
Adu05g02470 1108 PANTHER ABC TRANSPORTER B FAMILY MEMBER 8-RELATED 19 167 - -
Adu05g02470 1108 PANTHER ABC TRANSPORTER B FAMILY MEMBER 8-RELATED 171 1105 - -
Adu05g02470 1108 Gene3D - 858 1108 IPR027417 -
Adu05g02470 1108 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 228 464 IPR003439 GO:0005524
Adu05g02470 1108 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 868 1104 IPR003439 GO:0005524
Adu05g02470 1108 Pfam ABC transporter transmembrane region 544 814 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu05g02470 1108 Pfam ABC transporter transmembrane region 38 174 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02470 Adu-Chr5 89646744 89655220 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02470 200 486 Calmodulin-binding Proteins AT2G36910 50.347 1.74e-82 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02470 K05658 - gmx:100801088 1511.89