Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02460 ATGACACCACCCTCACGTGACCAATTTCCGTTACTCTCTTCCCTTCTCACCTTCTTCCTTATTTTCAACATTACCAACTCCCTGCTTCACGATCAAGAACACCAACTCCTCCTGAGGATAAAACAGTACTTTCACAACCCACCTTCACTCTCTCACTGGACCCCCTCCTCCTCCTCCTCCTCCTCTCACTGTTCTTGGCCTGAGATCACCTGCAACAACGACGGTTCCGTCACCGGAATAACCCTATCCAACGCCAATCTCAACCAAACAATACCTTCTTTCTTGTGTGACCTCAAGAACCTGACACGTGTCGATTTCAGCCAGAACTTTATTCCCGGCGATTTTCCGATCACTCTCTACAACTGCTCTCAACTTCAATACCTTGATTTGCACATGAACAACTTCGTCGGAGAAGTTCCCGATGACATTGACACGCTGTCAAATTTGCAGTACCTGAATCTCGCTTCGACGAACTTCGCCGGCGACGTTCCGGCGGCAATCGGAAAATTGAAGGAGCTCAGAGTGCTTCGCCTTCAGTACTGTCTTTTTAACGGAACTTTGCCTGATGAGATTGGAGATTTGTCCAATCTTGAATTCTTGGATTTGTCAACAAACACCATGCTTCCTTCTACAACGCTGCCACCAAGCTGGACCAGGTTGAAGAAACTGAAGATTTTTTATGTGTTTGCATGCAACCTGGTTGGTGAAATTCCTGAAACAATTGGAGAAATGGTGGCTTTGGAGGAGCTTGATTTGTCGCAGAACAAGTTAACTGGACAAATTCCAAGTGGTTTGTTCAAGCCGAAGAATCTGAGCATTGTGTACCTTTCGAGAAACAAGCTCTCTGGAACGATACCTGATGTGATTGAAGCATCAAACTTGACCATCATTGATCTAACAAATAATAACCTTACAGGGAAGATACCGAATGATTTCCGAAAGCTCGGAAACTTAAAGGGACTGAAATTGTCTTTGAATAGCTTGTCAGGGGAGCTACCTCAAAGCTTAGGCCATCTGCCAGCTCTGATCGATTTTCGTGTCTTCAGCAACAAGTTATCAGGTACTCTTCCCTCTGACTTTGGCCGCTACTCAAAGCTTGAAATCTTTCTTGCTGGAGACAATGATTTCACTGGAAATCTGCCAGAGGACTTGTGTTATTATGGTGTGTTGCATAATTTAACTGTCTATGAAAATAATCTGAATGGGGAGTTGCCAGAGTCACTAGGAAATTGCAGAACCCTGCAGGAGCTGAAAATTCAGAAGAATGGATTTTCTGGTAGCATTCCTAGTGGCCTATGGACATCTTTCAATTTGTCTAATTTCATTGTGGCGCATAATAAGTTTAGTGGTGAGCTTCCTGAAAGATTGTCTGCGAATATTTCGCGCTTTGATATCGGTGACAATCAGTTTTCCGGTAGAATTCCGGCCGGCGTGTCTTCCTGGACCAATGTGGAATACTTTGATGCCAGCAAGAACAACCTTACTGGAAGTATGCCACCTGGGATCACTGCTCTTCCCAAGCTGCTATACCTCGATCTTCATCAGAACCAGCTCACTGGGCCACTTCCATCAGATATATTATCATGGAAGTCCCTAGAAATTCTAGTTTTGAGCCAAAACAAACTCTCAGGACAAATTCCAGTCTCGATTGGCCGGTTACCAGCTCTTAATATGCTTGACCTCTCAGAAAATCAATTCTCTGGCCAAATTCCCTCTCTACCTTCAACACTCAGCAATTTCAATCTATCCTCCAATCACTTGACTGGGAGGATTCCGAGTGAATTCGAAAATTCTGTATATGCTAGCTGCTTTTTGGACAACTCCGGCCTCTGTGCTGCTACTCGAGTGCTTAACCTTGCTTTGTGTAATTCTAGCCCTCAAAGGCAAACCAAAGGCTCATCTTGGTCTCTTGGTTTGATTATAAGCCTGGTGGTTATAGCCATTTTCCTGGCTTCATTAGCTGCATTCTTGATTACCAGACTTTACAGCAAAAGAAAGCGTGGATTGGACAATTCATGGAAGCTCATTTCCTTTCAAAGGCTGAGTTTCAGAGAATCAAGCATAGTATCATCATTGACAGAGAATAATATCATTGGCAGTGGTGGATACGGTACAGTGTACCGTGTGCCTGTTGATGGATTTGGCTATGTTGCAGTGAAAAAGATTTGGAATAACAGAAAGTTAAACCACAGGCTTGAGAGCTCATTTCACGCAGAAGTTAAGATATTGAGCAATATTCGTCATGGCAACATTGTGAAGTTGTTGTGCTGTATCTTCAATGAGGATTCTATGCTCCTTGTCTACGAGTACCTAGAGAATCATAGCCTAGATAAGTGGCTGCACAAGAAGAGCAAGTCATCATCCATGTCTGGTAAAGTCAATCATTTTTTTCTTGATTGGCCAAAGAGATTGCGAattgccattggtattgcccaaggcctaacatacatgcaccatgattgctcgccgcctgtggttcatagagatgtgaaaacaagcaacatacttttggattctcaattcaatgcaaaagttgcagattttggtcttgcaaGGATGACGATCAAGCCCCTTACCACCATGACAAGTGTTGTTGGCTCATTTGGATATATTGCTCCAGAATATGTTCAAACAACAAAAGTGAGCGAAAAGATCGATGTCTTCAGCTTTGGGGTTATACTATTGGAATTAACAACTGGAAAAGAAGCTAATTATGGAGATGAGCACTCATCTCTTTCAGAGTGGGCATGGCGCCACGTTCAGTTAGGAACCAATGTAGACGAACTGCTGGACACTGATGTCTTGGAGGCTAGTTACAGTGATGAAATGTGCAGTGTTTTTAAACTTGGGGTCATGTGTACTTCACCATTGCCTGCTGGTAGGCCTCAAATGAAGGAGGCTTTGCAACTGTTGCATCGATTCGGTGAAGGATATGAATTTGGAGAGAGGAATATTGGGAAAGATGAAATTATTCCCCTTATTAAGAATTCAAAAACGGAAGCAAGGCTGGATATTGACAATGATAGTGACTAA 3033 0.4131 MTPPSRDQFPLLSSLLTFFLIFNITNSLLHDQEHQLLLRIKQYFHNPPSLSHWTPSSSSSSSHCSWPEITCNNDGSVTGITLSNANLNQTIPSFLCDLKNLTRVDFSQNFIPGDFPITLYNCSQLQYLDLHMNNFVGEVPDDIDTLSNLQYLNLASTNFAGDVPAAIGKLKELRVLRLQYCLFNGTLPDEIGDLSNLEFLDLSTNTMLPSTTLPPSWTRLKKLKIFYVFACNLVGEIPETIGEMVALEELDLSQNKLTGQIPSGLFKPKNLSIVYLSRNKLSGTIPDVIEASNLTIIDLTNNNLTGKIPNDFRKLGNLKGLKLSLNSLSGELPQSLGHLPALIDFRVFSNKLSGTLPSDFGRYSKLEIFLAGDNDFTGNLPEDLCYYGVLHNLTVYENNLNGELPESLGNCRTLQELKIQKNGFSGSIPSGLWTSFNLSNFIVAHNKFSGELPERLSANISRFDIGDNQFSGRIPAGVSSWTNVEYFDASKNNLTGSMPPGITALPKLLYLDLHQNQLTGPLPSDILSWKSLEILVLSQNKLSGQIPVSIGRLPALNMLDLSENQFSGQIPSLPSTLSNFNLSSNHLTGRIPSEFENSVYASCFLDNSGLCAATRVLNLALCNSSPQRQTKGSSWSLGLIISLVVIAIFLASLAAFLITRLYSKRKRGLDNSWKLISFQRLSFRESSIVSSLTENNIIGSGGYGTVYRVPVDGFGYVAVKKIWNNRKLNHRLESSFHAEVKILSNIRHGNIVKLLCCIFNEDSMLLVYEYLENHSLDKWLHKKSKSSSMSGKVNHFFLDWPKRLRIAIGIAQGLTYMHHDCSPPVVHRDVKTSNILLDSQFNAKVADFGLARMTIKPLTTMTSVVGSFGYIAPEYVQTTKVSEKIDVFSFGVILLELTTGKEANYGDEHSSLSEWAWRHVQLGTNVDELLDTDVLEASYSDEMCSVFKLGVMCTSPLPAGRPQMKEALQLLHRFGEGYEFGERNIGKDEIIPLIKNSKTEARLDIDNDSD 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02460 1010 SMART serkin_6 692 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02460 1010 Gene3D Ribonuclease Inhibitor 352 630 IPR032675 -
Adu05g02460 1010 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 12 1002 - -
Adu05g02460 1010 Gene3D Ribonuclease Inhibitor 290 351 IPR032675 -
Adu05g02460 1010 Gene3D Transferase(Phosphotransferase) domain 1 771 985 - -
Adu05g02460 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Adu05g02460 1010 Gene3D Phosphorylase Kinase; domain 1 674 770 - -
Adu05g02460 1010 SUPERFAMILY L domain-like 37 370 - -
Adu05g02460 1010 ProSiteProfiles Protein kinase domain profile. 692 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02460 1010 SMART LRR_typ_2 244 268 IPR003591 -
Adu05g02460 1010 SMART LRR_typ_2 194 220 IPR003591 -
Adu05g02460 1010 SMART LRR_typ_2 505 529 IPR003591 -
Adu05g02460 1010 SMART LRR_typ_2 553 580 IPR003591 -
Adu05g02460 1010 SMART LRR_typ_2 315 339 IPR003591 -
Adu05g02460 1010 Gene3D Ribonuclease Inhibitor 187 289 IPR032675 -
Adu05g02460 1010 Gene3D Ribonuclease Inhibitor 30 186 IPR032675 -
Adu05g02460 1010 Pfam Protein kinase domain 694 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g02460 1010 ProSitePatterns Protein kinases ATP-binding region signature. 698 721 IPR017441 GO:0005524
Adu05g02460 1010 Pfam Leucine Rich Repeat 293 315 IPR001611 GO:0005515
Adu05g02460 1010 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 12 1002 - -
Adu05g02460 1010 SUPERFAMILY Protein kinase-like (PK-like) 687 971 IPR011009 -
Adu05g02460 1010 SUPERFAMILY RNI-like 297 598 - -
Adu05g02460 1010 Pfam Leucine rich repeat N-terminal domain 31 72 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02460 Adu-Chr5 89442398 89446090 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02460 33 975 Receptor kinase-like Gene Family AT5G25930 50.052 0.0 897
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu05g02460 Pkinase 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02460 - - gmx:100798963 1315.06