Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02438 ATGGTAACCAACAAAGAGAAAAACAATACAGAGAATGGGCACAAGAAAAAAGAGGAACATGACAAAAGGGAGATAGTGAAAGGAAGGACAAGGAATGAGGTACTGGAGAAAGATGATTTGGGAAACGAAATGATGGATAATCAACAGAACCATACACAGTTATCATCCTTGAAAACAGCATCAGCAGGAGATTCTCCCAAGAAATACTTAACGGAAAGCCAAATGAAAAGAGCTAAGTCCCTATCTAAGACACCACAACCTGAGCCCAATCATGCAAACCTACCTAGTGAAACCCTAACATCTACACCCAAAAGAAAATCACACAGCTATCAAGCCCAAATAGTAGTCCTTTTGGCTAGCCCAATCGGCAAACCACCTGAATCCATCCACATAACCATTGTTGAGATAATACCCAGCCCACAACACCCTAACCCAAATTATATGGATACTTCAACTGAAGACACTATGGTCCACGAGATTAGTAGATACAACCAAGCCATCCATGTCCATATAGTTGAAGATAATAGGAGTTGGTTCCTCACTATCGTGTATGCTCACCCTCAAGAAGGACGAAGAAGGGAGGTGTGGGAGTTTCTCAAGAGCATCGCGAACATGATACAAAGTCCATGGTTGATGTACGAGGACTTTAACAATATAACCTCCCATTATAACAACAAACACCACCTCAAAGAACACAAAAAGCAGTGGTGTTTGCTGTTTAGTTCCCCTCACCCTTCTAATCTCACTCACCGCCACCGTTATGTTCTGACACAGAAAATTTTTCATCCAAGACAAGTCAACATCTTTTACAGAAAAAAGTTGTACCAAGGTGTTGGTGTTGGTGTTGGCAATGGTGGTGGAGGAGGAGTGGTTTGGGTTGGGGGAGGGGTTAACAACCCACAACCCTCTGGATCTTCTTCAGAATCAAAGCTGGATGGAGCTTACACAGCGCTACAGGCATGGAAATCTGCAATCACTGATGACCCAAAGAAAATTCTAGGAACATGGGTTGGTCCAAATGTGTGTTCTTACAAAGGGGTTTTTTGTGATTTTACTGAAGATGAAATGGGTGCATCTGCATCAGCATTCCCTGTAGTTGCAGGCATAGATCTCAACCATGCAAATCTCCAAGGAACCCTTGTCAAAGAGCTATCTTTACTCACTGACATGTCCCTTTTCCACCTTAACAGTAACAGGTTCACTGGTACTGTCCCTGATGAATTCAGAGACCTCAACTCTCTTGAAGAATTTGACCTCAGCAACAACCAATTCTCAGGTTCTTTCCCTTCTGCTACTTTGTACATGCCAAGCCTCATCTACTTGGACCTCAGGTTCAACTACTTCTCCGGGACAATCCCTCAAGAACTCTTCTACAAGAATCTTGATGCACTGTTTCTCAACAACAATCAATTTGAAGGTGAAATCCCTCAGAATCTTGGAAATTCCCCTGCATCAGTGATAAATTTAGCCAACAACAAGTTGAGTGGGAACATCCCAGCAAGTTTTGGATTCATGGGTTCTAAATTGAAGGAGATTCTGTTCCTGAATAACCAGTTAACTGGTTGTATCCCTGAAGGAGTGGGGCTATTCACTGAGATTCAAGTTCTGGATGTTAGCTACAATACTCTCATGGGTCATGTGCCAGACACATTGTCTTGTCTGCAAGACATTCAAGTCCTTAACTTGGCACATAACAAGCTTTCTGGGGAGTTATCAGATGTAATATGCTCTCTGAGGAGCCTTGCAAATTTGACTGTTGCTTACAATTTCTTTTCTGGGTTCAGCCAACAATGTTCAAGGCTTTTCTTCAGGAATGTGGGTTTTGATGTCTCACTTAACTGCATTCCTGGAAGGGACATGCAGAGACCTCAACCTGAGTGTTCTGTGATCCCAGGTGGTAGTCTAAGTTGTCTCAGAATTCCAACACCAAAGCCTCTTGTTTGCGGTTCCCTGGCTGTAAGTGCTTCTAAGCACACTAATTCTACTTCATCATCTCCTTGA 2001 0.4278 MVTNKEKNNTENGHKKKEEHDKREIVKGRTRNEVLEKDDLGNEMMDNQQNHTQLSSLKTASAGDSPKKYLTESQMKRAKSLSKTPQPEPNHANLPSETLTSTPKRKSHSYQAQIVVLLASPIGKPPESIHITIVEIIPSPQHPNPNYMDTSTEDTMVHEISRYNQAIHVHIVEDNRSWFLTIVYAHPQEGRRREVWEFLKSIANMIQSPWLMYEDFNNITSHYNNKHHLKEHKKQWCLLFSSPHPSNLTHRHRYVLTQKIFHPRQVNIFYRKKLYQGVGVGVGNGGGGGVVWVGGGVNNPQPSGSSSESKLDGAYTALQAWKSAITDDPKKILGTWVGPNVCSYKGVFCDFTEDEMGASASAFPVVAGIDLNHANLQGTLVKELSLLTDMSLFHLNSNRFTGTVPDEFRDLNSLEEFDLSNNQFSGSFPSATLYMPSLIYLDLRFNYFSGTIPQELFYKNLDALFLNNNQFEGEIPQNLGNSPASVINLANNKLSGNIPASFGFMGSKLKEILFLNNQLTGCIPEGVGLFTEIQVLDVSYNTLMGHVPDTLSCLQDIQVLNLAHNKLSGELSDVICSLRSLANLTVAYNFFSGFSQQCSRLFFRNVGFDVSLNCIPGRDMQRPQPECSVIPGGSLSCLRIPTPKPLVCGSLAVSASKHTNSTSSSP 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02438 666 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 274 666 - -
Adu05g02438 666 Gene3D Ribonuclease Inhibitor 314 481 IPR032675 -
Adu05g02438 666 PANTHER LRR/EXTENSIN 274 666 - -
Adu05g02438 666 MobiDBLite consensus disorder prediction 1 106 - -
Adu05g02438 666 Pfam Leucine rich repeat N-terminal domain 315 350 IPR013210 -
Adu05g02438 666 MobiDBLite consensus disorder prediction 75 106 - -
Adu05g02438 666 Gene3D Ribonuclease Inhibitor 482 601 IPR032675 -
Adu05g02438 666 Gene3D Endonuclease/exonuclease/phosphatase 97 279 IPR036691 -
Adu05g02438 666 Pfam Leucine rich repeat 394 447 IPR001611 GO:0005515
Adu05g02438 666 MobiDBLite consensus disorder prediction 45 68 - -
Adu05g02438 666 MobiDBLite consensus disorder prediction 1 44 - -
Adu05g02438 666 SUPERFAMILY L domain-like 315 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02438 Adu-Chr5 88988842 88993303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02438 301 639 Leucine-rich Repeat extension Gene Families AT3G24480 48.696 6.01e-104 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02438 - - gmx:100775544 627.476