Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02436 ATGAATAATAATAAGATAAGCAACATGAGCTCCGTGAGTAGCTCCGATCTCATAGATGCCAAGCTTGAAGAGCATCAGTTGTGTGGAGGATCCAAGCAGTGCCCCGGTTGCGGCCACAAGTTTGAATCCAAACCGGATTGGCTAGGTTTACCAGCAGGAGTGAAGTTTGATCCAACAGATCAAGAACTAATAGAGCATCTTGAAGCCAAAGTGGAGTCAAAGAACATGAAATCACACCCTTTGATAGACGAATTCATTCCCACCATTGAAGGTGAAGATGGGATTTGTTACACCCATCCTGAGAAACTTCCAGGAGTAACAAGAGATGGATTAAGTAAACACTTCTTCCATAGGCCTTCAAAGGCATACACAACAGGAACAAGAAAGAGGAGAAAGATTCAAAATGAGTGTGACTTGCAAGGTGGAGAAACGAGGTGGCATAAGACCGGTAAAACAAGACCGGTCATGGTTAACGGAAAACAGAAGGGTTGCAAGAAGATTTTGGTACTCTACACTAACTTCGGCAAGAATCGGAAGCCGGAGAAGACGAATTGGGTCATGCATCAATACCATTTGGGGCAGCATGAGGAGGAGAAAGAAGGAGAGCTTGTTGTGTCCAAGATATTCTACCAAACTCAGCCTAGGCAGTGTAATTGGTCGTCCGATCGGAGCGCCACCACCACCATCGCTACGGCCGAAGGGAGTGGAGAGCCACTACAAAATAGTAGAAGAGATAGCGGAAGTGGAAGTTGTTCTTCTAAGGAAATTAACATAGGTCATAAGGATGAGATGTCTGCTGTGGTTGGAGTTACTAATACTCCAATCACAGGCTTCGCTCATCCCTTGGACATTCATCATCATCTCAAATCGGATCATTTTAGCTTCATCCCATTTAGGAAAAGCTTTGATGAGGTTGGAATAGGAGAGGCTTCAACAGCAAGAGAAGTTCAAGCATCAGGGTCATGTGATGAAGTAGTACATGAACATGTAAATCATCATCATCAACAACAACAACAACATCATCATCATCATCAAATTNNNNNNNNNNNNNNACATCCAATCTCTACCTTGATATCTCCACCACCACTTCACCACACATCCATCATCTTAGACGATAATTCCTACCAAGTCTCCAGAATAATGCTCCAAAATGAACATTTCCAGCAACAACAACAACAACATCAACAACATCATCATAAAATTGGAGCAAGGTCTGCGTCTGGTTTGGAGGAACTCATCATGGGGTGCACTTCTTCTGATATCAAAGAGGAGTCATCCATCACAAACCCACAAGAAGCTGAATGGTTGAAATACTCTTCCTATTGGCCAGACCCTGACAACCCGGATCATCATGGGTAG 1359 0.4319 MNNNKISNMSSVSSSDLIDAKLEEHQLCGGSKQCPGCGHKFESKPDWLGLPAGVKFDPTDQELIEHLEAKVESKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSKHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSSDRSATTTIATAEGSGEPLQNSRRDSGSGSCSSKEINIGHKDEMSAVVGVTNTPITGFAHPLDIHHHLKSDHFSFIPFRKSFDEVGIGEASTAREVQASGSCDEVVHEHVNHHHQQQQQHHHHHQIXXXXXHPISTLISPPPLHHTSIILDDNSYQVSRIMLQNEHFQQQQQQHQQHHHKIGARSASGLEELIMGCTSSDIKEESSITNPQEAEWLKYSSYWPDPDNPDHHG 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02436 452 MobiDBLite consensus disorder prediction 223 255 - -
Adu05g02436 452 Gene3D NAC domain 59 215 IPR036093 GO:0003677|GO:0006355
Adu05g02436 452 SUPERFAMILY NAC domain 45 211 IPR036093 GO:0003677|GO:0006355
Adu05g02436 452 MobiDBLite consensus disorder prediction 223 257 - -
Adu05g02436 452 ProSiteProfiles NAC domain profile. 50 211 IPR003441 GO:0003677|GO:0006355
Adu05g02436 452 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 5 435 - -
Adu05g02436 452 Pfam No apical meristem (NAM) protein 51 192 IPR003441 GO:0003677|GO:0006355
Adu05g02436 452 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 5 435 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02436 Adu-Chr5 88918335 88922604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02436 13 449 NAC Transcription Factor Family AT5G56620 51.739 1.03e-136 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu05g02436 NAM 1.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02436 - - aip:107641312 759.214