Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02430 ATGTCATCGCCGGCGTTTCAACGTCATGCGGCCTTCCCTAGGCTCCTCATAGGATCCATTTCTTATGTGCAGATATCTGGCAAGAAAGACCCTCCAATCAGCTCTTCCAAGAATAAGTTAAAAACACTCAGCTGGCAAGAACGACGGAAACTTGAAAGAGATAGAAAGCAGAAAGAAGAGGATGAGCAAACATTAGCAAAAGTGGAAGCTCCAATACCACAATCCAACATTGGGTTTAAGCTTCTCAAACAAATGGGTTATACGCCCAGTGCTGCCCTAGGCAAAGAGGGTTTGGGTAGGGCTGAGCCAGTGGGGATTGAGATTCGACGATCACGAGTTGGTATTGGCTTAGATGATCCTTACAAAGAGAAGAGGAAAAATGAGAAAATCATAGCTGAGAGAAAAAGGAGGAAAGAGGAGGATCTAATGCAAGACTTTGGGTTGAGACAGAAGTCGCGATGGCAGAGTAAGAGAGTTGTAGCCAATTTCCATAAGGCAAAGGTTGCCCTTGATCAATTAGAGAATAGAGAAATCATTGAACCGGAAAAGAATGAGAATGATAAAGAAGAGGAAGATGAGGAAGAGGAAGAAATAACAGAAGAGGATTTGCAAGAAGTTTTGATGAAACTGAGGGATGACCACAATTATTGCCTCTTTTGTGGATGCAAGTATGAATCAAAGGATGCTCTCTTTACCAACTGCACTGAAACCAATGAAGATGATCACTAA 729 0.4252 MSSPAFQRHAAFPRLLIGSISYVQISGKKDPPISSSKNKLKTLSWQERRKLERDRKQKEEDEQTLAKVEAPIPQSNIGFKLLKQMGYTPSAALGKEGLGRAEPVGIEIRRSRVGIGLDDPYKEKRKNEKIIAERKRRKEEDLMQDFGLRQKSRWQSKRVVANFHKAKVALDQLENREIIEPEKNENDKEEEDEEEEEITEEDLQEVLMKLRDDHNYCLFCGCKYESKDALFTNCTETNEDDH 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02430 242 PANTHER UNCHARACTERIZED 27 242 IPR039249 -
Adu05g02430 242 Coils Coil 184 213 - -
Adu05g02430 242 SMART DUF4187_2 188 242 IPR025239 -
Adu05g02430 242 SMART G-patch_5 72 118 IPR000467 GO:0003676
Adu05g02430 242 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 11 27 242 - -
Adu05g02430 242 Coils Coil 48 68 - -
Adu05g02430 242 MobiDBLite consensus disorder prediction 175 201 - -
Adu05g02430 242 MobiDBLite consensus disorder prediction 184 201 - -
Adu05g02430 242 ProSiteProfiles G-patch domain profile. 74 120 IPR000467 GO:0003676
Adu05g02430 242 Pfam G-patch domain 74 117 IPR000467 GO:0003676
Adu05g02430 242 MobiDBLite consensus disorder prediction 27 69 - -
Adu05g02430 242 MobiDBLite consensus disorder prediction 42 66 - -
Adu05g02430 242 Pfam Domain of unknown function (DUF4187) 189 242 IPR025239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02430 Adu-Chr5 88679519 88680849 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02430 66 116 C2H2 Transcription Factor Family AT5G26610 41.176 7.49e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02430 - - adu:107490107 393.66