LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu05g02406	ATGGTGGTAGCAGTGCCAAATCAGGATCACCATCATTCCTCCTTCATCTTCAAAAGGCTCAAGAGGGAGGAATGCAGCCACACCAAACATGATTCTATCTTCTCCAAATGGAAGGTTCTTCATACAGTATTACATATTTACAAAACACAAAATTGCTTACTTCAAAGGAATTTGATCAAATTTGTTGCTGAATTGTTGCAGATTTTAATTGGTGCTTCCGATTGGGAAGATCATTCAAAGGGAAAAGAAGGATGTGCAAGATACAGGATCCATAACCTGCCAGAAAAAGCTTGTCCAGGTGTATATGAGCTTGGAATAGCTGTGTCATCAAGGAATGATTTGGGGAGGCAAATTTACAAACTTGCCCCTGAGTGTGTAGTTGTGACTTACCTTGGAGAAACTGATAATGTAAGGGATAGGCTGCAATGCTATGGCAGAGATGGATCTCATTTGCACAGCAAAACTTCTCCTGAATACTCAATTTATGATTCTCTCCAAAAGAAGAGGCCATTGTTTCAGGAGATTTTTTCACAGGGATACCCTATTGTTTATAGATGGGTTGCTATGAACAATAAAGAAGAGGCCAAGAGAATAGAGTCTCAGCTGCTTAAAACATTTGATTATGCATGGAATATAAGCAGTAATGGTTGCCGGCGGCCGAACGATATTCTTCAAAAGATAAACAAGATTTCCTCCAGCACAAGAACAATCTCAGATATGGCCAGGGAGCTCCTACCTTTCACCCGAAAACAAGTCGGTATCCGAATTAAAGTAGATGAAGAAGAAGAAGACAGTGATGGCATCTACAGTTTCATATCTAGGGTGTTCAAATTCAACAAATCAAGGCCTAGGAAAGTCGAAAATATCGTCATTGCCAATCAGCAGGATGCTGTAATTTGTGGGGTGGCTTTAGGTGATGGTTCTGTCTGTATAAATACACCAGCTGAAAGAAGAAAGAGGTGTCCTCAACACAAAGGAATGAGAATTAATAATGTGTCCCCTGCCAAAGCATTTGTATCCCCAAAATCAAAGAGCAATTTGGTTTCAGAAATCAATAAGTTTATGGACCAAAATGTTAGCAATGATGATGTACCAGACATTCCAAAAAAACCAGTTGAAGAGAGTAGTAGTAAAACCAATATATGTGGAATCATATTGTATGATGGTTCACCTTGTAGAAGAGTACCGGTTAAAGGAAGGAAAAGGTGCCAAGAGCATAAAGGAAAGAAAATTTATGCCAAGCAGAAGATGATTTAA	1257	0.3914	MVVAVPNQDHHHSSFIFKRLKREECSHTKHDSIFSKWKVLHTVLHIYKTQNCLLQRNLIKFVAELLQILIGASDWEDHSKGKEGCARYRIHNLPEKACPGVYELGIAVSSRNDLGRQIYKLAPECVVVTYLGETDNVRDRLQCYGRDGSHLHSKTSPEYSIYDSLQKKRPLFQEIFSQGYPIVYRWVAMNNKEEAKRIESQLLKTFDYAWNISSNGCRRPNDILQKINKISSSTRTISDMARELLPFTRKQVGIRIKVDEEEEDSDGIYSFISRVFKFNKSRPRKVENIVIANQQDAVICGVALGDGSVCINTPAERRKRCPQHKGMRINNVSPAKAFVSPKSKSNLVSEINKFMDQNVSNDDVPDIPKKPVEESSSKTNICGIILYDGSPCRRVPVKGRKRCQEHKGKKIYAKQKMI	418

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu05g02406	418	PANTHER	PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED	16	414	IPR038909	GO:0003677\|GO:0006355
	Adu05g02406	418	Pfam	GIY-YIG domain-containing protein	67	224	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu05g02406	20	413	HRT Transcription Factor Family	AT5G56780	38.995	5.86e-87	271

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	HRT	Adu05g02406		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu05g02406	-		-	adu:107490117	781.941