Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02404 ATGGGGAGGAAGTGTTCACATTGTGGGAACATAGGGCACAATTCAAGAACATGCACAACATCACCTATGATGATGATGATGAGAGGAGGAACAACAAATAATAATAGTTTTGTAGGGCTTAGGCTCTTTGGGGTTCAACTTGATATATCATCTTCATCATGTTGTGTTGCAATGAAGAAAAGTTTTAGCATGGATTCATTGCCCTCTTCATCTTCAACAACTACTACTACTTCTTCCTTCTCATCTTCAAGATTACCCATTGATGATAACATCACCCTCAACAACAATAATTCTTCTGCTTTTGGCTACCTTTCAGATGGTCTCATCGTTCCTCCGCAAGACAGGAAAAAGGGAGTACCATGGACAGAAGAAGAGCACAGAACTTTCCTGGTTGGACTTGAGAAACTAGGAAAGGGTGACTGGAGAGGAATATCTAGAAACTATGTGACCACAAGGACTCCAACCCAAGTTGCAAGCCATGCTCAAAAATACTTTCTCAGATTGGCAACTATCAATAAGAAGAAGAGACGCTCAAGTCTCTTTGACTTGGTTGGCATAGGCAACAATAACACAAAAACAGAATTTCATGATGCTGTTGGTGGCATAACTAATTGCAAATCAGGAGATTCAAGTGTAATTGTTTGTAATGAGTCAAAATTAGAAGAAGTTGTTGAGAATAATGACATTGATCATGCCACTCTATCACTTCTAGGGCGCCTTACCCCATTTCATCAAGAAATCAAATCAGATAATGACCTAAAAGTAAAAACCATTAACCATGATAATTATAATCATAATCATCAACCATTTTGGCCTCATCATCAACAACACATGAATTCTTCGTCAACAGTGCCTGATTTGGAGCTCACTCTTGCAGCTCCAGAAGATCAAAATAAATCAACATCCCCCGGTTCCTTCTTTTTTGGTCCAATTAGTGTTACTTAA 945 0.3873 MGRKCSHCGNIGHNSRTCTTSPMMMMMRGGTTNNNSFVGLRLFGVQLDISSSSCCVAMKKSFSMDSLPSSSSTTTTTSSFSSSRLPIDDNITLNNNNSSAFGYLSDGLIVPPQDRKKGVPWTEEEHRTFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLATINKKKRRSSLFDLVGIGNNNTKTEFHDAVGGITNCKSGDSSVIVCNESKLEEVVENNDIDHATLSLLGRLTPFHQEIKSDNDLKVKTINHDNYNHNHQPFWPHHQQHMNSSSTVPDLELTLAAPEDQNKSTSPGSFFFGPISVT 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02404 314 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 314 - -
Adu05g02404 314 CDD SANT 120 165 IPR001005 -
Adu05g02404 314 Pfam Myb-like DNA-binding domain 120 165 IPR001005 -
Adu05g02404 314 ProSiteProfiles SANT domain profile. 121 169 IPR017884 -
Adu05g02404 314 Gene3D - 119 171 - -
Adu05g02404 314 ProSiteProfiles Myb-like domain profile. 113 165 IPR001005 -
Adu05g02404 314 MobiDBLite consensus disorder prediction 64 83 - -
Adu05g02404 314 PANTHER TRANSCRIPTION FACTOR KUA1 1 314 - -
Adu05g02404 314 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
Adu05g02404 314 MobiDBLite consensus disorder prediction 294 314 - -
Adu05g02404 314 SMART sant 117 167 IPR001005 -
Adu05g02404 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 113 169 IPR017930 -
Adu05g02404 314 SUPERFAMILY Homeodomain-like 115 169 IPR009057 -
Adu05g02404 314 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 116 167 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02404 Adu-Chr5 88344567 88346903 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu05g02404 Myb_DNA-binding 2.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02404 - - adu:107490116 618.231