Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02384 ATGAAGACGCAGCCTGAACCTGCCGCCGTCGTCGCCGTACCTAACCCCGAAGAGAAGAAGAGCATCAACCCGGAGCTATGGCAAGCGTGTGCGGGGCCGTTGGTGAACCTTCCGCCGGCGGGAACACACGTCTTCTACTTCCCTCAAGGACACAGTGAGCAGGTCGCAGCGTCTTTGAAGAAAGATGTGGATGGACAGATTCCAAACTATCCTAATCTTCCATCCAAGTTGTTGTGTCTCCTTCACAGTGTTACTTTGCATGCTGACCCAGAAACCGATGAAGTTTATGCTCAGATGACACTTCAACCTGTGCCTTCTTATGATAAGGAAGCTTTATTAAGATCAGATCTTGCTCTCAAGTCAAACAAGGCACAGCCTGAGTTTTTCTGCAAACAGCTGACAGCTAGTGATACAAGCACACATGGAGGTTTCTCTGTGCCTCGCCGAGCAGCAGAGAAAATATTCCCTCCTCTTGATTATTCTATGCAACCTCCTGCACAAGAACTTGTGGCTAGGGATTTGCATGATAATGTTTGGACTTTCCGTCATATATATCGAGGGCAACCAAAGCGCCACTTGCTTACAACTGGATGGAGTCTATTTGTCAGTGGAAAGAGGCTCTTTGCTGGAGACTCTGTTTTATTTATACGAGATGAAAAGCAGCAGCTTCTTTTGGGCATCAGGCGAGCTAACAGGCAACCAGCCAACATATCATCCTCGGTATTGTCAAGTGATAGTATGCATATTGGGATTCTTGCGGCAGCTGCTCATGCTGCTGCAAATAATAGTCCCTTTACCGTCTTTTACAATCCTAGGGCTAGTCCTTCAGAGTTTGTTATTCCTTTAGCCAAGTACTACAAGGCAGTGTACAGCCATCAAATATCACCTGGAATGCGTTTCCGAATGATGTTTGAAACCGAAGACTCAGGAACTAGAAGGTATATGGGTACAATTACAGGAATCAGTGATCTAGATCCTGTGAGATGGAAAAATTCACAATGGCGTAATTTGCAGGTTGGTTGGGATGAGTCAACTGCTGGGGAAAAGCGTAGCAGGGTTTCACTTTGGGAAATTGAACCAGTGACTGCTCCTTTTTTCATCTGCCCTCCGCGGACAATGCCTTGGCTTGGTGATGATATGTGCATGAAGGATCCTCAAGGCCTACCTGGCATGAGCTTAGTTCAATGGATGAACATGCAGCAAAATCCTAGTCTTGCTAACTCAATGCAGCCTAATTATGTACCATCATTGCCTGGATCTGTTTTGCAAAATCTTCCTGGTGCAGATATTTCCCGTCAGCTGGGGTTTTCTTCTTCACAAATTCCTCAGCCTAACAATGTAGCCTTCAACACTCAGAGGCTACTTCAGACTGCACAACAACTTGATCATCTTCAGAAGCTACCGTCAGCATCTGTCAACTTGGGAACAGTGATGCAGCCGCAGCAACAGTTGGGTGATATCTCTCAACAATCTAAGCAGAACTTAGGAAGTCAAACTCTTCCACAGAGTCAAGTTCAGGCCCAGATCTTGCATCCCCAGAATCTTGTCCAAACAAACAATATTCTTCAACAGCAACAATCATCCATTCAAAACCACCAATTCAATCGATGTGTCCCTCAGAACCCTCCACAGCAGCAGCAACAGCAACAGACAATTATGGGTCAGAATCAGCAACAAACTATGGTCCCATCTACTATACCTGACCATGTTCAACAGTTACAGATGTCTGATAATCAGATTCAGCTTCAATTGTTACAAAAGCTTCAACAGCAACAGCAAACACTCTTAGCACAACAATCTGCGCTGCAGCAGCCTTCTCAACTTGCTCAAATCCAAGATCAGCAGAGGCAACTGTTAGATGCAGCACAGAGCTTCTCTAGGTTAGTCCCTCCTGGTCAAGTGCTTGAAATTCCTCCGGTACTTCAAAATTCACTCCCAGAGAGTAATGCGATCACAAATCAAATGACAAAGGCTGGTCGGAGCAATATACATATCTCTCATTTGCCTCAGCAGCCAAAGCCTCAGCAACAATCTGGCTTGCTGCCTGAGATGTCTGGTCAAATGGCACTTCCCCCTACCCCTTCACCAAACCAGCTCTCTGCTGCTGGCAGTGGCATACTGAATGGAGCAGCTGTAGCTGGACAATCTGTAATTACTGATGATGTTCCATCTTGCTCCACCTCACCTTCTACAAATAACTCTGCCAGTGCAGTTCCATTATTGATAAATTCCCAGTTACATAGAAGCTCAATAACTGCTGATGACATGGCTCAATCTACTGCAACATTATTGAGTTCAGGTGCTTTAGAAACCATGTCATCAGGTGCAAACATGGTAAAAGATTTACAGCCCAAGTCTGAAGTCAAGCCTTCTTTAAACATCTCCAAAAATCAGAATCAAGGGAGTTTGGTTCATCAGACATACTTGAATGGTGCTGCTGCTCAAACAGATTATTTGGATACATCATCTTCGACAACTTCAGTTTGCCTATCTCAGAGTGATGCTCACATGCATCAGAATAACAACCCGATGTCTTACAATCCACAGTCTATGTTGTTTAGAGACAACAGTCAGGATGGGGAAATTCTCTTTTACCCAAAGGCACAGTGGGGATGGGGAAGGATATGTCGAATAATTTCAACAATAGATGATAGTAGCTTCTTGAATAGGGGTGGATGGGCTCCACCACCACCACCACCACCACCGCCATTGCCAGCACCACAGTTTCAGCGTATGAGGACATATACCAAGGTTTATAAACGAGGAGCTGTCGGAAGGTCCATAGACATCACTCGGTATTCAGATTATGAGGAGCTTAAACATGATCTAGCTCGCAGATTTGGCATAGAGGGCCAGCTGGAGGATCGACACAGGATAGGCTGGAAACTTGTCTATGTAGATCATGAAAATGATGTTCTACTAGTGGGAGACGACCCTTGGGAGGAGTTTGTTAATTGTGTACGCTGTATCAAGATTCTTTCTCCCCAAGAAGTACAACAGATGAGCTTGGATGGAGATTTTGGCAATGCTAGCCTTCCAAATCAAGCTTGTAGCAGCTCTGATGGTGGGAATACTTGA 3078 0.4519 MKTQPEPAAVVAVPNPEEKKSINPELWQACAGPLVNLPPAGTHVFYFPQGHSEQVAASLKKDVDGQIPNYPNLPSKLLCLLHSVTLHADPETDEVYAQMTLQPVPSYDKEALLRSDLALKSNKAQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANISSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSLWEIEPVTAPFFICPPRTMPWLGDDMCMKDPQGLPGMSLVQWMNMQQNPSLANSMQPNYVPSLPGSVLQNLPGADISRQLGFSSSQIPQPNNVAFNTQRLLQTAQQLDHLQKLPSASVNLGTVMQPQQQLGDISQQSKQNLGSQTLPQSQVQAQILHPQNLVQTNNILQQQQSSIQNHQFNRCVPQNPPQQQQQQQTIMGQNQQQTMVPSTIPDHVQQLQMSDNQIQLQLLQKLQQQQQTLLAQQSALQQPSQLAQIQDQQRQLLDAAQSFSRLVPPGQVLEIPPVLQNSLPESNAITNQMTKAGRSNIHISHLPQQPKPQQQSGLLPEMSGQMALPPTPSPNQLSAAGSGILNGAAVAGQSVITDDVPSCSTSPSTNNSASAVPLLINSQLHRSSITADDMAQSTATLLSSGALETMSSGANMVKDLQPKSEVKPSLNISKNQNQGSLVHQTYLNGAAAQTDYLDTSSSTTSVCLSQSDAHMHQNNNPMSYNPQSMLFRDNSQDGEILFYPKAQWGWGRICRIISTIDDSSFLNRGGWAPPPPPPPPPLPAPQFQRMRTYTKVYKRGAVGRSIDITRYSDYEELKHDLARRFGIEGQLEDRHRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNASLPNQACSSSDGGNT 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02384 1025 Pfam AUX/IAA family 913 998 IPR033389 -
Adu05g02384 1025 Gene3D - 127 230 IPR015300 -
Adu05g02384 1025 ProSiteProfiles PB1 domain profile. 913 997 IPR000270 GO:0005515
Adu05g02384 1025 MobiDBLite consensus disorder prediction 538 559 - -
Adu05g02384 1025 SMART B3_2 129 231 IPR003340 GO:0003677
Adu05g02384 1025 MobiDBLite consensus disorder prediction 666 683 - -
Adu05g02384 1025 MobiDBLite consensus disorder prediction 666 703 - -
Adu05g02384 1025 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 8 368 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu05g02384 1025 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 371 873 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu05g02384 1025 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 878 1020 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu05g02384 1025 CDD B3_DNA 128 220 IPR003340 GO:0003677
Adu05g02384 1025 Gene3D - 908 1002 - -
Adu05g02384 1025 PANTHER AUXIN RESPONSE FACTOR 371 873 - -
Adu05g02384 1025 SUPERFAMILY DNA-binding pseudobarrel domain 119 258 IPR015300 -
Adu05g02384 1025 Gene3D - 293 364 - -
Adu05g02384 1025 SUPERFAMILY CAD & PB1 domains 926 991 - -
Adu05g02384 1025 Pfam B3 DNA binding domain 129 230 IPR003340 GO:0003677
Adu05g02384 1025 Pfam Auxin response factor 255 338 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Adu05g02384 1025 PANTHER AUXIN RESPONSE FACTOR 878 1020 - -
Adu05g02384 1025 PANTHER AUXIN RESPONSE FACTOR 8 368 - -
Adu05g02384 1025 ProSiteProfiles B3 DNA-binding domain profile. 129 231 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02384 Adu-Chr5 88004508 88011238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02384 7 452 B3 DNA Binding Superfamily AT5G20730 66.189 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Adu05g02384 B3 1.5e-19 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02384 - - ccaj:109803454 1275.77