Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02368 ATGGCAAAACCTATACCCAAAATTGGTTCGCGTAAAAATGGACGTATTGGTTCACGTAAACATGCTCGTAAAATACCAAAGGGCGTTATTCATGTTCAAGCTAGTTTCAACAATACCATTGTCACTGTTACCGATGTACGGGGTCGGGTAATTTCGTGGTCCTCCGCAGGTACTTGTGGATTCAAAGGTACGCGAAGGGGAACACCATTTGCCGCCCAAACCGCAGCAGGAAATGTTATTCGAACAGTAGCGAATCAAGGCATGCAACGAGCAGAAGTCATGATAAAGGGTCCCGGTCTTGGAAGAGATGCGGTATTAAGAGCTATTCGTAGAAGTGGCCAAGCTGATACAATAGGCATTGCGATGCGAAGAGTTTTGCTTGGAGAAATAGAGGGAACATGTATCACACGTGCAAAATCTGAGAAAATACCACATGAATATTCGACCATAGTAGCCATTTTAGTTGTTAGAAATCCGCAAACCATTCCCACTTTTGGTCAGAATTTCTTTGAATATGTCCTCGAATTCATTCGAGATGTAAGTAAAACTCAGATTGGGGAAGAATATGGTCCGTGGGTTCCCTTTGTTGGAACTATGTTCTTATTTATTTTTGTTTCAAATTGGTCGGGGGCTCTTTTGCCTTGGAAAATAATACAGTTACCTCATGGGGAGTTAGCTGCACCCACAAATGATATAAATACTACTGTTGCATTAGCTTTACTTACATCAGTAGCATATTTCTATGCGGGTCTTTCGAAAAAGGGATTAGCTTATTTTGGTAAATACATCCAACCAACTCCAATCCTTCTACCAATTAACATCTTAGAAGATTTCACAAAACCCCTGTCGCTTAGCTTTCGACTTTTCGGAAATATATTAGCTGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTACCCTTAGTAGTTCCTATACCTGTCATGTTCCTTGGATTATTTACAAGCGGTATTCAAGCCCTTATTTTTGCTACTTTAGCTGCGGCTTATATAGGTGAATCCATGGAAGGCCATCATTAA 1038 0.4037 MAKPIPKIGSRKNGRIGSRKHARKIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNVIRTVANQGMQRAEVMIKGPGLGRDAVLRAIRRSGQADTIGIAMRRVLLGEIEGTCITRAKSEKIPHEYSTIVAILVVRNPQTIPTFGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFVGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLAYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02368 345 CDD ATP-synt_Fo_a_6 189 338 - -
Adu05g02368 345 ProSitePatterns ATP synthase a subunit signature. 283 292 IPR023011 -
Adu05g02368 345 Hamap 30S ribosomal protein S11 [rpsK]. 11 142 IPR001971 GO:0003735|GO:0005840|GO:0006412
Adu05g02368 345 SUPERFAMILY Translational machinery components 23 113 - -
Adu05g02368 345 TIGRFAM ATP_synt_6_or_A: ATP synthase F0, A subunit 150 340 IPR000568 GO:0015078|GO:0015986|GO:0045263
Adu05g02368 345 SUPERFAMILY F1F0 ATP synthase subunit A 187 338 IPR035908 -
Adu05g02368 345 MobiDBLite consensus disorder prediction 1 24 - -
Adu05g02368 345 Gene3D ATP synthase, F0 complex, subunit A 189 344 IPR035908 -
Adu05g02368 345 PRINTS ATP synthase A subunit signature 280 302 IPR000568 GO:0015078|GO:0015986|GO:0045263
Adu05g02368 345 PRINTS ATP synthase A subunit signature 264 279 IPR000568 GO:0015078|GO:0015986|GO:0045263
Adu05g02368 345 PRINTS ATP synthase A subunit signature 324 339 IPR000568 GO:0015078|GO:0015986|GO:0045263
Adu05g02368 345 PRINTS ATP synthase A subunit signature 195 211 IPR000568 GO:0015078|GO:0015986|GO:0045263
Adu05g02368 345 Hamap ATP synthase subunit a [atpB]. 145 344 IPR000568 GO:0015078|GO:0015986|GO:0045263
Adu05g02368 345 PANTHER ATP SYNTHASE SUBUNIT A, CHLOROPLASTIC 150 343 IPR045082 GO:0015078|GO:0015986|GO:0045263
Adu05g02368 345 Pfam Ribosomal protein S11 28 114 IPR001971 GO:0003735|GO:0005840|GO:0006412
Adu05g02368 345 Pfam ATP synthase A chain 150 337 IPR000568 GO:0015078|GO:0015986|GO:0045263
Adu05g02368 345 Gene3D Ribosomal protein S11 12 154 IPR036967 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02368 Adu-Chr5 87641302 87643449 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02368 28 113 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 36.842 9.53e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02368 K02108 - csv:3429379 360.918