Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02339 ATGCGCGAGTGGCGAGTGCGCTTCCTCGGAACTTCAAAACCTCTCTGCTCTTTCTCACGTTCTCTCTCTCAGCAAAGCAAAATTCGCATAGGAGAGAGAAATCGACATTGTAGATTCCGTCTGAGTTTGCTGATTTGGAGAAGGAGAGAGGAAGAGCCCGAAGATCTGTGTCTTTGCAAAGCTGAGAGATTGAAGATGGAATTATTGCAGGGTGGCGATGAGTCTGGTGGGGAGAGTGATAGCTTTGATTGGAACAGCGAAGATGAGCGTGAAATTGAGAACTTTCAGTCTTCTTCTTTACGTTTAACTGTTCCTAATGGAGCGGTTCTCACTGGGTCTGGAGAGGCAAGCCCCTCTGCAGGTCCATCTAATTCCAAGGTATTTGATCATTTCGTGAGTATGGGATTTCCGAGAGAAATGGTCTCCAAAGTAATTGAGGAATATGGTGAGGAAAATGAAGACAAACTACTTGAAGAACTTCTCTCGTACTCGGTTATAGAAAGTTCTCCTCAGCCCCAACAGCGAATTGAACCAAATCATTGCTCTTTGGTTTTAGAAAGTCCCCATCAACCACAAGTAAAAATTGAGCCAGATCTTAGCTCTTCTGAAGGTGGAGTGAGCTCTTGGGAAAACTCAGATTCTGATGCTTTATCCGATGAGGAGGAAATGACGAAATCTCTTCGTGGGAGTGACAACATTGTATTGACGTTGGTGAAAATGGGGTACAAGCAGGATGAAGCCCTAATTGCCATAGAAAGATTAGGTTGCAACTCTTCTGTAGATGAACTAATAGATTTTATAGGTGTTGCTCAAATGGCAAAGGCTGAAGATGCTCTTCTACCTCCTGAAGAAAAGCCTGGCATTTCTAAGTTAAATAAGCGAAGATATTATGAATTAGAAGTGTTGGGAAGGAAAAGGCCTAAAAGCTGTGAGAAGAGAATAATCAGTGAAGATGATGATGAGCCACTTCATCTTCCAAACCCGATGATTGGTTTTGGGGTTCCTACTGAGCCAGCTATCATAAAACACAGAAAACTTCCAGACGATGCTGTTGGGCCTCCTTACTTCTATTATGAAAATGTGGCACTTGCACCAAAGGGGGTTTGGCAAACTATTTCTAGGTTCTTGTATGAGGTGGAACCTGAATTTGTTGACTCAAAGTTTTTCTGCGCTGCAGCCAGGAAAAGGGGCTATATCCACAATCTTCCCATTGAAAACAGATTCCCACTTCTTCCACTTCCGCCACGTACAATACATGAGGCGTTTCCCCTAACAAGGAAGTGGTGGCCTTCATGGGACACTAGGACCAAACTAAATTGTCTGCAAACAGCTATTGGCAGTGCAAAACTAACAGAGAGAATCAGGAAGGCTCTAGAGAACTATGATGGAGAGCCACCTGAGGATGTCCAAAGGTTTGTTCTTGAGCAGTGTCGGAAATGGAATCTGGTTTGGGTGGGAAGGAATAAGGTTGCTCCACTAGAGCCTGATGAAGTTGAAACACTGTTGGGTTTCCCAAGGAACCACACTAGAGGAGGCGGGATAAGTCGAACTGACAGATACAAGTCACTTGGCAATTCATTCCAGGTCGACACAGTGGCATACCACTTGTCAGTTCTGAAGGACATGTATCCCAATGGTATGAACATTCTTTCTCTGTTTTCTGGGATCGGCGGTGCTGAGGTTGCCCTTCATCGTCTTGGCATCCCCCTTAAGAACGTTGTTTCAGTTGAGAAGTCAGAAGTGAACAGAAACATAGTTCGAAGCTGGTGGGAGCAAACAAACCAGAAGGGTAATCTTATTGACTTGGATGATGTGCAACAGCTAAACGGCGATCGTATCGAGAAGCTGATGAACACATTTGGGGGTTTCGATCTCATTGTTGGCGGCAGCCCTTGCAACAACCTTGCTGGGAGCAATAGGGTAAGCAGGGATGGATTAGAGGGGTCTCTCTTCCGTTCGCTGTTCCTTCTCTTATTTCCCGTCAGCTACTTCAACTTCCCCTTCTCCGGTGCGTGCCGTTGGGCCTCGTCGACCCGGAAAACCCGCAACCCGGACCCGAATCCGATTACATATTCGTACATACTGCATAGAAGTTGCACGCAGAATCTGAGGCTAGTTCTCGTTTACATCTATCTATACACAGATTTACATTGCCGTTCCCTTGCAATGGCTGCCACAGCAACTGCCTCTTCAGTTGGTCCGCGGTATGCACCACCAGACCCTACTTTACCAAAACCATGGCGCGGTCTTGTGGATGGAAAGACTGGGTATCTTTATTTTTGGAATCCTGAAACTAATGTTACCCAATATGAGCGGCCTTCGAGCTCATCTGCCCCACCTAAGTATTCTTCTTCGGTGTCTAGTTCCTCTGTCCAGGTTCAACAGTCATCTCAAGGGCAGCAGCGTGGTCGCAGTCCTGAGTTGAGTGATAGGTATGATAGAAACAGTGGAGGTGGGTCAAACAATGAAGGTGGATTGCGCAACTACCAGGAGTCGAAAGGTGGAAATTTTAGCTCTCATAATACTCCAAATGGGATGCATTCTGCTGGAAATGTTAGTTCCTCTATCAAAGGTCAAGGAGCACCAGATACTGGAGTTGGGTTATCTCCAGAGGCTTATCGGCGTCGGCATGAAATTACAGTTACTGGTGATGATGTTCCTCCACCACTTACGTCATTCGGTTCAAGTGGCCTTCCCTCTGAGATTCTTAGAGAGGTACAAAATGCTGGGTTCTCTGCCCCAACTCCAATTCAGGCACAGTCGTGGCCTATTGCTCTTCAAAGTAGAGATATAGTTGCAATTGCTAAAACAGGTTCAGGGAAGACTCTGGGGTATTTAATTCCAGCATTTATTCATCTCAAGCGCACTGGTAATGATCCAAGAATGGGCCCCACAGCATTGGTACTATCACCAACAAGGGAACTGGCAACACAGATACAAGATGAAGCTGTGAAGTTTGGGAAATCGTCAAAAATTACTTGTGCATGTTTGTATGGAGGAGCACCAAAGGGTCCTCAATTGAGGGATATTGATCGTGGAGCAGATATTGTGGTAGCCACTCCTGGCCGTTTGAATGATATTCTTGAGATGAGGAGAATTACTCTTAACCAGATTTCTTATCTAGTGCTGGACGAGGCAGACAGGATGCTGGACATGGGCTTTGAGCCTCAAATTAGAAAGATTGTAAATGAGGTGCCTGCTCGTAGGCAAACTCTTATGTATACTGCAACATGGCCTAAGGAGGTTAGGAAAATTGCAGCTGACCTGCTGGTCAATCCCGTTCAGGTGAACATCGGGAATGTAGATGAGCTTGTTGCTAACAAATCTATTACTCAGCATGTTGAAGTATTGACCTACATGGAGAAACAGAGACGACTGGAAAATATTTTGCGGTCACAGGATCAAGGATCTAAAATAATTATTTTTTGTTCTACCAAGAAAATGTGTGATCAACTTGCTCGTAATCTTGCACGCCAGTTTGGAGCTGCTGCTATTCACGGGGATAAATCCCAGTCTGAGAGGGACCATGTCTTGAATCAATTTCGGACTGGGAGGTCTCCTGTCCTTGTTGCTACGGATGTTGCAGCTCGAGGATTGGACATTAAAGACATCAGGGTGGTTGTCAACTATGACTTCCCTACAGGAGTGGAAGATTATGTTCATAGGATTGGGAGGACCGGGAGAGCTGGGGCCACTGGTTTGGCATACACTTTCTTTGGGGAGCAGGATGCTAAACATGCTACAGACCTCATCAAAGTCTTGGAAGGTGCAAACCAGCGAGTTCCTCCTGAACTTCGGGATATGTCAGGACGGGGTGGTGGGATGAATAGATCCAGACGATGGGGTTCTTCTGGTTCTGGCCGCGGGGGACGCGGTGACTCTGGATTTGGTGGAAGGAATAATGATTCTGGATACGGTGGAAGGGGTAGTGATTCTGGATACAGTGGAAGGGGTAGTAGTGATGCTGGATATGGTAGCAGAGTTGGCGACTCTAGTTATGGAGGAAAGGGTGGGTGGTCTGCTTCTGGCAGAGGTGGAGGTCGTGGGTCAGACTATGATTCACAGAGGAATGATCGGGCTCGGAGTCCTGACAGGGGATCTAGTTGGAGTGATCGCTTCAAAAACCGTGATCGCAGTCGTAGCCGTAGCCGTAGCCCTGTCAGGGTCCCACCAAATTCCAATGTCAGCTTTCACAAAGCAATGATGGAACGTGGTGGAGGTGATAGTGATCGCAAGGGTTTTAATCGGGACCGAAGCCGCAGTCCTGCCCCCTACAGCAAGGACCGGGCTCCCACTGGTCGCGAACGTTCCCCCCCTTACAGTTTTCATCGCTCTGTTATGGGGCAAGGTCGATCATCCTCCCCATATCGACAGCAGCATGCAGAGGAAAAAGCATTAAGACGCAGTCCTAATCGAAGTTCACCATCCTCTCCTGGTGGTGGTAGATCGAACAATGGTACTCAAAAGGAGTGGGGAGGGTCTCATGGTGACGGGAAGTATGGTGGATCTTCCTATAATGGAGAAGAGGAGGAAGGCATGATACCTGATGAAGAAGGCATGATAGGTCAAGATGATGGTGTATATCAAAATGCAGACTAG 4599 0.4677 MREWRVRFLGTSKPLCSFSRSLSQQSKIRIGERNRHCRFRLSLLIWRRREEEPEDLCLCKAERLKMELLQGGDESGGESDSFDWNSEDEREIENFQSSSLRLTVPNGAVLTGSGEASPSAGPSNSKVFDHFVSMGFPREMVSKVIEEYGEENEDKLLEELLSYSVIESSPQPQQRIEPNHCSLVLESPHQPQVKIEPDLSSSEGGVSSWENSDSDALSDEEEMTKSLRGSDNIVLTLVKMGYKQDEALIAIERLGCNSSVDELIDFIGVAQMAKAEDALLPPEEKPGISKLNKRRYYELEVLGRKRPKSCEKRIISEDDDEPLHLPNPMIGFGVPTEPAIIKHRKLPDDAVGPPYFYYENVALAPKGVWQTISRFLYEVEPEFVDSKFFCAAARKRGYIHNLPIENRFPLLPLPPRTIHEAFPLTRKWWPSWDTRTKLNCLQTAIGSAKLTERIRKALENYDGEPPEDVQRFVLEQCRKWNLVWVGRNKVAPLEPDEVETLLGFPRNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKDMYPNGMNILSLFSGIGGAEVALHRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLIDLDDVQQLNGDRIEKLMNTFGGFDLIVGGSPCNNLAGSNRVSRDGLEGSLFRSLFLLLFPVSYFNFPFSGACRWASSTRKTRNPDPNPITYSYILHRSCTQNLRLVLVYIYLYTDLHCRSLAMAATATASSVGPRYAPPDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPSSSSAPPKYSSSVSSSSVQVQQSSQGQQRGRSPELSDRYDRNSGGGSNNEGGLRNYQESKGGNFSSHNTPNGMHSAGNVSSSIKGQGAPDTGVGLSPEAYRRRHEITVTGDDVPPPLTSFGSSGLPSEILREVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFIHLKRTGNDPRMGPTALVLSPTRELATQIQDEAVKFGKSSKITCACLYGGAPKGPQLRDIDRGADIVVATPGRLNDILEMRRITLNQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHVEVLTYMEKQRRLENILRSQDQGSKIIIFCSTKKMCDQLARNLARQFGAAAIHGDKSQSERDHVLNQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGLAYTFFGEQDAKHATDLIKVLEGANQRVPPELRDMSGRGGGMNRSRRWGSSGSGRGGRGDSGFGGRNNDSGYGGRGSDSGYSGRGSSDAGYGSRVGDSSYGGKGGWSASGRGGGRGSDYDSQRNDRARSPDRGSSWSDRFKNRDRSRSRSRSPVRVPPNSNVSFHKAMMERGGGDSDRKGFNRDRSRSPAPYSKDRAPTGRERSPPYSFHRSVMGQGRSSSPYRQQHAEEKALRRSPNRSSPSSPGGGRSNNGTQKEWGGSHGDGKYGGSSYNGEEEEGMIPDEEGMIGQDDGVYQNAD 1532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02339 1532 ProSitePatterns WW/rsp5/WWP domain signature. 747 773 IPR001202 GO:0005515
Adu05g02339 1532 Gene3D Vaccinia Virus protein VP39 537 664 IPR029063 -
Adu05g02339 1532 Gene3D Vaccinia Virus protein VP39 339 422 IPR029063 -
Adu05g02339 1532 Gene3D - 869 1100 IPR027417 -
Adu05g02339 1532 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 544 648 IPR029063 -
Adu05g02339 1532 ProSiteProfiles WW/rsp5/WWP domain profile. 741 775 IPR001202 GO:0005515
Adu05g02339 1532 Pfam Helicase conserved C-terminal domain 1122 1230 IPR001650 -
Adu05g02339 1532 ProSiteProfiles SAM-dependent methyltransferase DRM-type domain profile. 342 672 IPR030380 GO:0006306
Adu05g02339 1532 Pfam DEAD/DEAH box helicase 915 1085 IPR011545 GO:0003676|GO:0005524
Adu05g02339 1532 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 40 849 1361 - -
Adu05g02339 1532 MobiDBLite consensus disorder prediction 1470 1491 - -
Adu05g02339 1532 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 891 919 IPR014014 GO:0003724
Adu05g02339 1532 SMART helicmild6 1150 1230 IPR001650 -
Adu05g02339 1532 MobiDBLite consensus disorder prediction 195 213 - -
Adu05g02339 1532 Gene3D - 1101 1271 IPR027417 -
Adu05g02339 1532 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 849 1361 - -
Adu05g02339 1532 MobiDBLite consensus disorder prediction 1403 1434 - -
Adu05g02339 1532 MobiDBLite consensus disorder prediction 1351 1384 - -
Adu05g02339 1532 MobiDBLite consensus disorder prediction 769 805 - -
Adu05g02339 1532 MobiDBLite consensus disorder prediction 769 869 - -
Adu05g02339 1532 SUPERFAMILY WW domain 735 774 IPR036020 GO:0005515
Adu05g02339 1532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 963 1246 IPR027417 -
Adu05g02339 1532 SMART ww_5 742 775 IPR001202 GO:0005515
Adu05g02339 1532 MobiDBLite consensus disorder prediction 1305 1319 - -
Adu05g02339 1532 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 1042 1050 IPR000629 -
Adu05g02339 1532 Pfam C-5 cytosine-specific DNA methylase 547 635 IPR001525 GO:0008168
Adu05g02339 1532 Gene3D - 110 164 - -
Adu05g02339 1532 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1112 1269 IPR001650 -
Adu05g02339 1532 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 922 1096 IPR014001 -
Adu05g02339 1532 CDD WW 744 773 IPR001202 GO:0005515
Adu05g02339 1532 Gene3D - 739 792 - -
Adu05g02339 1532 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 350 540 IPR029063 -
Adu05g02339 1532 SMART ultradead3 910 1113 IPR014001 -
Adu05g02339 1532 MobiDBLite consensus disorder prediction 195 225 - -
Adu05g02339 1532 MobiDBLite consensus disorder prediction 814 860 - -
Adu05g02339 1532 CDD SF2_C_DEAD 1110 1239 - -
Adu05g02339 1532 MobiDBLite consensus disorder prediction 1261 1532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02339 Adu-Chr5 86786918 86802146 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02339 889 1268 Eukaryotic Initiation Factors Gene Family AT3G19760 33.594 1.94e-64 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02339 K12823 - adu:107490066 1172.92