Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu05g02339 | ATGCGCGAGTGGCGAGTGCGCTTCCTCGGAACTTCAAAACCTCTCTGCTCTTTCTCACGTTCTCTCTCTCAGCAAAGCAAAATTCGCATAGGAGAGAGAAATCGACATTGTAGATTCCGTCTGAGTTTGCTGATTTGGAGAAGGAGAGAGGAAGAGCCCGAAGATCTGTGTCTTTGCAAAGCTGAGAGATTGAAGATGGAATTATTGCAGGGTGGCGATGAGTCTGGTGGGGAGAGTGATAGCTTTGATTGGAACAGCGAAGATGAGCGTGAAATTGAGAACTTTCAGTCTTCTTCTTTACGTTTAACTGTTCCTAATGGAGCGGTTCTCACTGGGTCTGGAGAGGCAAGCCCCTCTGCAGGTCCATCTAATTCCAAGGTATTTGATCATTTCGTGAGTATGGGATTTCCGAGAGAAATGGTCTCCAAAGTAATTGAGGAATATGGTGAGGAAAATGAAGACAAACTACTTGAAGAACTTCTCTCGTACTCGGTTATAGAAAGTTCTCCTCAGCCCCAACAGCGAATTGAACCAAATCATTGCTCTTTGGTTTTAGAAAGTCCCCATCAACCACAAGTAAAAATTGAGCCAGATCTTAGCTCTTCTGAAGGTGGAGTGAGCTCTTGGGAAAACTCAGATTCTGATGCTTTATCCGATGAGGAGGAAATGACGAAATCTCTTCGTGGGAGTGACAACATTGTATTGACGTTGGTGAAAATGGGGTACAAGCAGGATGAAGCCCTAATTGCCATAGAAAGATTAGGTTGCAACTCTTCTGTAGATGAACTAATAGATTTTATAGGTGTTGCTCAAATGGCAAAGGCTGAAGATGCTCTTCTACCTCCTGAAGAAAAGCCTGGCATTTCTAAGTTAAATAAGCGAAGATATTATGAATTAGAAGTGTTGGGAAGGAAAAGGCCTAAAAGCTGTGAGAAGAGAATAATCAGTGAAGATGATGATGAGCCACTTCATCTTCCAAACCCGATGATTGGTTTTGGGGTTCCTACTGAGCCAGCTATCATAAAACACAGAAAACTTCCAGACGATGCTGTTGGGCCTCCTTACTTCTATTATGAAAATGTGGCACTTGCACCAAAGGGGGTTTGGCAAACTATTTCTAGGTTCTTGTATGAGGTGGAACCTGAATTTGTTGACTCAAAGTTTTTCTGCGCTGCAGCCAGGAAAAGGGGCTATATCCACAATCTTCCCATTGAAAACAGATTCCCACTTCTTCCACTTCCGCCACGTACAATACATGAGGCGTTTCCCCTAACAAGGAAGTGGTGGCCTTCATGGGACACTAGGACCAAACTAAATTGTCTGCAAACAGCTATTGGCAGTGCAAAACTAACAGAGAGAATCAGGAAGGCTCTAGAGAACTATGATGGAGAGCCACCTGAGGATGTCCAAAGGTTTGTTCTTGAGCAGTGTCGGAAATGGAATCTGGTTTGGGTGGGAAGGAATAAGGTTGCTCCACTAGAGCCTGATGAAGTTGAAACACTGTTGGGTTTCCCAAGGAACCACACTAGAGGAGGCGGGATAAGTCGAACTGACAGATACAAGTCACTTGGCAATTCATTCCAGGTCGACACAGTGGCATACCACTTGTCAGTTCTGAAGGACATGTATCCCAATGGTATGAACATTCTTTCTCTGTTTTCTGGGATCGGCGGTGCTGAGGTTGCCCTTCATCGTCTTGGCATCCCCCTTAAGAACGTTGTTTCAGTTGAGAAGTCAGAAGTGAACAGAAACATAGTTCGAAGCTGGTGGGAGCAAACAAACCAGAAGGGTAATCTTATTGACTTGGATGATGTGCAACAGCTAAACGGCGATCGTATCGAGAAGCTGATGAACACATTTGGGGGTTTCGATCTCATTGTTGGCGGCAGCCCTTGCAACAACCTTGCTGGGAGCAATAGGGTAAGCAGGGATGGATTAGAGGGGTCTCTCTTCCGTTCGCTGTTCCTTCTCTTATTTCCCGTCAGCTACTTCAACTTCCCCTTCTCCGGTGCGTGCCGTTGGGCCTCGTCGACCCGGAAAACCCGCAACCCGGACCCGAATCCGATTACATATTCGTACATACTGCATAGAAGTTGCACGCAGAATCTGAGGCTAGTTCTCGTTTACATCTATCTATACACAGATTTACATTGCCGTTCCCTTGCAATGGCTGCCACAGCAACTGCCTCTTCAGTTGGTCCGCGGTATGCACCACCAGACCCTACTTTACCAAAACCATGGCGCGGTCTTGTGGATGGAAAGACTGGGTATCTTTATTTTTGGAATCCTGAAACTAATGTTACCCAATATGAGCGGCCTTCGAGCTCATCTGCCCCACCTAAGTATTCTTCTTCGGTGTCTAGTTCCTCTGTCCAGGTTCAACAGTCATCTCAAGGGCAGCAGCGTGGTCGCAGTCCTGAGTTGAGTGATAGGTATGATAGAAACAGTGGAGGTGGGTCAAACAATGAAGGTGGATTGCGCAACTACCAGGAGTCGAAAGGTGGAAATTTTAGCTCTCATAATACTCCAAATGGGATGCATTCTGCTGGAAATGTTAGTTCCTCTATCAAAGGTCAAGGAGCACCAGATACTGGAGTTGGGTTATCTCCAGAGGCTTATCGGCGTCGGCATGAAATTACAGTTACTGGTGATGATGTTCCTCCACCACTTACGTCATTCGGTTCAAGTGGCCTTCCCTCTGAGATTCTTAGAGAGGTACAAAATGCTGGGTTCTCTGCCCCAACTCCAATTCAGGCACAGTCGTGGCCTATTGCTCTTCAAAGTAGAGATATAGTTGCAATTGCTAAAACAGGTTCAGGGAAGACTCTGGGGTATTTAATTCCAGCATTTATTCATCTCAAGCGCACTGGTAATGATCCAAGAATGGGCCCCACAGCATTGGTACTATCACCAACAAGGGAACTGGCAACACAGATACAAGATGAAGCTGTGAAGTTTGGGAAATCGTCAAAAATTACTTGTGCATGTTTGTATGGAGGAGCACCAAAGGGTCCTCAATTGAGGGATATTGATCGTGGAGCAGATATTGTGGTAGCCACTCCTGGCCGTTTGAATGATATTCTTGAGATGAGGAGAATTACTCTTAACCAGATTTCTTATCTAGTGCTGGACGAGGCAGACAGGATGCTGGACATGGGCTTTGAGCCTCAAATTAGAAAGATTGTAAATGAGGTGCCTGCTCGTAGGCAAACTCTTATGTATACTGCAACATGGCCTAAGGAGGTTAGGAAAATTGCAGCTGACCTGCTGGTCAATCCCGTTCAGGTGAACATCGGGAATGTAGATGAGCTTGTTGCTAACAAATCTATTACTCAGCATGTTGAAGTATTGACCTACATGGAGAAACAGAGACGACTGGAAAATATTTTGCGGTCACAGGATCAAGGATCTAAAATAATTATTTTTTGTTCTACCAAGAAAATGTGTGATCAACTTGCTCGTAATCTTGCACGCCAGTTTGGAGCTGCTGCTATTCACGGGGATAAATCCCAGTCTGAGAGGGACCATGTCTTGAATCAATTTCGGACTGGGAGGTCTCCTGTCCTTGTTGCTACGGATGTTGCAGCTCGAGGATTGGACATTAAAGACATCAGGGTGGTTGTCAACTATGACTTCCCTACAGGAGTGGAAGATTATGTTCATAGGATTGGGAGGACCGGGAGAGCTGGGGCCACTGGTTTGGCATACACTTTCTTTGGGGAGCAGGATGCTAAACATGCTACAGACCTCATCAAAGTCTTGGAAGGTGCAAACCAGCGAGTTCCTCCTGAACTTCGGGATATGTCAGGACGGGGTGGTGGGATGAATAGATCCAGACGATGGGGTTCTTCTGGTTCTGGCCGCGGGGGACGCGGTGACTCTGGATTTGGTGGAAGGAATAATGATTCTGGATACGGTGGAAGGGGTAGTGATTCTGGATACAGTGGAAGGGGTAGTAGTGATGCTGGATATGGTAGCAGAGTTGGCGACTCTAGTTATGGAGGAAAGGGTGGGTGGTCTGCTTCTGGCAGAGGTGGAGGTCGTGGGTCAGACTATGATTCACAGAGGAATGATCGGGCTCGGAGTCCTGACAGGGGATCTAGTTGGAGTGATCGCTTCAAAAACCGTGATCGCAGTCGTAGCCGTAGCCGTAGCCCTGTCAGGGTCCCACCAAATTCCAATGTCAGCTTTCACAAAGCAATGATGGAACGTGGTGGAGGTGATAGTGATCGCAAGGGTTTTAATCGGGACCGAAGCCGCAGTCCTGCCCCCTACAGCAAGGACCGGGCTCCCACTGGTCGCGAACGTTCCCCCCCTTACAGTTTTCATCGCTCTGTTATGGGGCAAGGTCGATCATCCTCCCCATATCGACAGCAGCATGCAGAGGAAAAAGCATTAAGACGCAGTCCTAATCGAAGTTCACCATCCTCTCCTGGTGGTGGTAGATCGAACAATGGTACTCAAAAGGAGTGGGGAGGGTCTCATGGTGACGGGAAGTATGGTGGATCTTCCTATAATGGAGAAGAGGAGGAAGGCATGATACCTGATGAAGAAGGCATGATAGGTCAAGATGATGGTGTATATCAAAATGCAGACTAG | 4599 | 0.4677 | MREWRVRFLGTSKPLCSFSRSLSQQSKIRIGERNRHCRFRLSLLIWRRREEEPEDLCLCKAERLKMELLQGGDESGGESDSFDWNSEDEREIENFQSSSLRLTVPNGAVLTGSGEASPSAGPSNSKVFDHFVSMGFPREMVSKVIEEYGEENEDKLLEELLSYSVIESSPQPQQRIEPNHCSLVLESPHQPQVKIEPDLSSSEGGVSSWENSDSDALSDEEEMTKSLRGSDNIVLTLVKMGYKQDEALIAIERLGCNSSVDELIDFIGVAQMAKAEDALLPPEEKPGISKLNKRRYYELEVLGRKRPKSCEKRIISEDDDEPLHLPNPMIGFGVPTEPAIIKHRKLPDDAVGPPYFYYENVALAPKGVWQTISRFLYEVEPEFVDSKFFCAAARKRGYIHNLPIENRFPLLPLPPRTIHEAFPLTRKWWPSWDTRTKLNCLQTAIGSAKLTERIRKALENYDGEPPEDVQRFVLEQCRKWNLVWVGRNKVAPLEPDEVETLLGFPRNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKDMYPNGMNILSLFSGIGGAEVALHRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLIDLDDVQQLNGDRIEKLMNTFGGFDLIVGGSPCNNLAGSNRVSRDGLEGSLFRSLFLLLFPVSYFNFPFSGACRWASSTRKTRNPDPNPITYSYILHRSCTQNLRLVLVYIYLYTDLHCRSLAMAATATASSVGPRYAPPDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPSSSSAPPKYSSSVSSSSVQVQQSSQGQQRGRSPELSDRYDRNSGGGSNNEGGLRNYQESKGGNFSSHNTPNGMHSAGNVSSSIKGQGAPDTGVGLSPEAYRRRHEITVTGDDVPPPLTSFGSSGLPSEILREVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFIHLKRTGNDPRMGPTALVLSPTRELATQIQDEAVKFGKSSKITCACLYGGAPKGPQLRDIDRGADIVVATPGRLNDILEMRRITLNQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHVEVLTYMEKQRRLENILRSQDQGSKIIIFCSTKKMCDQLARNLARQFGAAAIHGDKSQSERDHVLNQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGLAYTFFGEQDAKHATDLIKVLEGANQRVPPELRDMSGRGGGMNRSRRWGSSGSGRGGRGDSGFGGRNNDSGYGGRGSDSGYSGRGSSDAGYGSRVGDSSYGGKGGWSASGRGGGRGSDYDSQRNDRARSPDRGSSWSDRFKNRDRSRSRSRSPVRVPPNSNVSFHKAMMERGGGDSDRKGFNRDRSRSPAPYSKDRAPTGRERSPPYSFHRSVMGQGRSSSPYRQQHAEEKALRRSPNRSSPSSPGGGRSNNGTQKEWGGSHGDGKYGGSSYNGEEEEGMIPDEEGMIGQDDGVYQNAD | 1532 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu05g02339 | 1532 | ProSitePatterns | WW/rsp5/WWP domain signature. | 747 | 773 | IPR001202 | GO:0005515 | |
Adu05g02339 | 1532 | Gene3D | Vaccinia Virus protein VP39 | 537 | 664 | IPR029063 | - | |
Adu05g02339 | 1532 | Gene3D | Vaccinia Virus protein VP39 | 339 | 422 | IPR029063 | - | |
Adu05g02339 | 1532 | Gene3D | - | 869 | 1100 | IPR027417 | - | |
Adu05g02339 | 1532 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 544 | 648 | IPR029063 | - | |
Adu05g02339 | 1532 | ProSiteProfiles | WW/rsp5/WWP domain profile. | 741 | 775 | IPR001202 | GO:0005515 | |
Adu05g02339 | 1532 | Pfam | Helicase conserved C-terminal domain | 1122 | 1230 | IPR001650 | - | |
Adu05g02339 | 1532 | ProSiteProfiles | SAM-dependent methyltransferase DRM-type domain profile. | 342 | 672 | IPR030380 | GO:0006306 | |
Adu05g02339 | 1532 | Pfam | DEAD/DEAH box helicase | 915 | 1085 | IPR011545 | GO:0003676|GO:0005524 | |
Adu05g02339 | 1532 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 40 | 849 | 1361 | - | - | |
Adu05g02339 | 1532 | MobiDBLite | consensus disorder prediction | 1470 | 1491 | - | - | |
Adu05g02339 | 1532 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 891 | 919 | IPR014014 | GO:0003724 | |
Adu05g02339 | 1532 | SMART | helicmild6 | 1150 | 1230 | IPR001650 | - | |
Adu05g02339 | 1532 | MobiDBLite | consensus disorder prediction | 195 | 213 | - | - | |
Adu05g02339 | 1532 | Gene3D | - | 1101 | 1271 | IPR027417 | - | |
Adu05g02339 | 1532 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 849 | 1361 | - | - | |
Adu05g02339 | 1532 | MobiDBLite | consensus disorder prediction | 1403 | 1434 | - | - | |
Adu05g02339 | 1532 | MobiDBLite | consensus disorder prediction | 1351 | 1384 | - | - | |
Adu05g02339 | 1532 | MobiDBLite | consensus disorder prediction | 769 | 805 | - | - | |
Adu05g02339 | 1532 | MobiDBLite | consensus disorder prediction | 769 | 869 | - | - | |
Adu05g02339 | 1532 | SUPERFAMILY | WW domain | 735 | 774 | IPR036020 | GO:0005515 | |
Adu05g02339 | 1532 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 963 | 1246 | IPR027417 | - | |
Adu05g02339 | 1532 | SMART | ww_5 | 742 | 775 | IPR001202 | GO:0005515 | |
Adu05g02339 | 1532 | MobiDBLite | consensus disorder prediction | 1305 | 1319 | - | - | |
Adu05g02339 | 1532 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 1042 | 1050 | IPR000629 | - | |
Adu05g02339 | 1532 | Pfam | C-5 cytosine-specific DNA methylase | 547 | 635 | IPR001525 | GO:0008168 | |
Adu05g02339 | 1532 | Gene3D | - | 110 | 164 | - | - | |
Adu05g02339 | 1532 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 1112 | 1269 | IPR001650 | - | |
Adu05g02339 | 1532 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 922 | 1096 | IPR014001 | - | |
Adu05g02339 | 1532 | CDD | WW | 744 | 773 | IPR001202 | GO:0005515 | |
Adu05g02339 | 1532 | Gene3D | - | 739 | 792 | - | - | |
Adu05g02339 | 1532 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 350 | 540 | IPR029063 | - | |
Adu05g02339 | 1532 | SMART | ultradead3 | 910 | 1113 | IPR014001 | - | |
Adu05g02339 | 1532 | MobiDBLite | consensus disorder prediction | 195 | 225 | - | - | |
Adu05g02339 | 1532 | MobiDBLite | consensus disorder prediction | 814 | 860 | - | - | |
Adu05g02339 | 1532 | CDD | SF2_C_DEAD | 1110 | 1239 | - | - | |
Adu05g02339 | 1532 | MobiDBLite | consensus disorder prediction | 1261 | 1532 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu05g02339 | Adu-Chr5 | 86786918 | 86802146 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu05g02339 | 889 | 1268 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 33.594 | 1.94e-64 | 223 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu05g02339 | K12823 | - | adu:107490066 | 1172.92 |