Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02337 ATGTCTTCTTCATCACTCGGCATCTATCCTCCGTCGGATTCTTCCTGCTCACGGTCGTCTTGTCGCCATCGTCTCGGCGTCATTGTCTCAAAGTGGCAGGTAGCAATGGCAGCTAGGTATGATCTTATCAAGTGTATCAATGCTGGTCCAGCGCATAAGGCACCTATTGAGATGGTTGTCCTTGATGAAGAGGGAGATACAATTCAATGCACTGTAAAAGACATATTTGTTCCTATCTTCGAGGGCTTACTCGTTGAGGGCAACGTGTACGTGGTCACTAATTTTGGAGTTGCTTTGAATACCATCAAGTTCAAGCCTACTAGACACGAATTTAGGATCCATTTCAAGAGGGACACGATTGTGCGTCCGGTACAGGATTCTTCAGTTCCATTGAACGGATTCAATTTTGTTCCGTTCAAAACAATTCAATCAGAGTCTAAAGAAGATGGTTATTTAGTTGGGGTCATGGGTGTATCCAACACAAACTACAATTCGAAACTGTTTATCAATGTTGAGTTTCCAGCTGCCAGGGATTTCTTTACGAGGGTGAACAAATTGGATCCTGTTGACGGACAAGGCATAATGCCGCTGGAGCATAATCAGGATGCTGTATTTGTTACAGCCGGGACGATTAAAGAAGTTGAGACTGAATTTGGGTGGTGGTACAAAGGATATAAGAAGTGTCGTCGTGGCTTGAGGGAACTTGAGAAAAGATATTTCTGTCCCAATTGCATTAGAGACTACGGGTACATCATCCACATAAGGGTGATAGACCACACCGATGCTGCCTCTTTTGTTTTGTTCGATAGAGAAGCTGCAAAGTTTCTTGGAGTTTCTGCTAATGACCTAGGCAGTCTTGGTGTTGAGAAAAATTCCTGTCCCGAAGAGATTAATAAGCTTAGGGATATTAAGTTCATCTTCAAAGTGCAACTCAAGATGAGGAATCTGAACTCTTATGAACCATATGTGATTCATGTGCTGAGAATGACTAATGAGAATTTTCTGATCTTTGCCTTCCTGGATAAATACAATCCTGACACTGGCCTTTTGTCCCATGAAAATTCTGAACTATTGAATTTGTCTACTGGTCCATACGACACTTCTAAGGCTTGTGAGAGTGAGCCAACTCTATCACCTGCAGTTGATGAAAAACATAATTCTAAGATTCTCGGAGCTAAGAAACATATTGAAGAGATTGGAGAGGAGTCAATTTCATCCAAATCTAAGAAAGGGAAGTGGGTTGTGGTGGAGGACTAA 1257 0.4216 MSSSSLGIYPPSDSSCSRSSCRHRLGVIVSKWQVAMAARYDLIKCINAGPAHKAPIEMVVLDEEGDTIQCTVKDIFVPIFEGLLVEGNVYVVTNFGVALNTIKFKPTRHEFRIHFKRDTIVRPVQDSSVPLNGFNFVPFKTIQSESKEDGYLVGVMGVSNTNYNSKLFINVEFPAARDFFTRVNKLDPVDGQGIMPLEHNQDAVFVTAGTIKEVETEFGWWYKGYKKCRRGLRELEKRYFCPNCIRDYGYIIHIRVIDHTDAASFVLFDREAAKFLGVSANDLGSLGVEKNSCPEEINKLRDIKFIFKVQLKMRNLNSYEPYVIHVLRMTNENFLIFAFLDKYNPDTGLLSHENSELLNLSTGPYDTSKACESEPTLSPAVDEKHNSKILGAKKHIEEIGEESISSKSKKGKWVVVED 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02337 418 PANTHER REPLICATION FACTOR A 1, RFA1 250 331 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu05g02337 418 PANTHER REPLICATION FACTOR A 1, RFA1 61 145 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu05g02337 418 Pfam Replication factor-A C terminal domain 205 319 IPR013955 -
Adu05g02337 418 Gene3D - 22 127 IPR012340 -
Adu05g02337 418 Pfam Domain of unknown function DUF223 57 147 IPR003871 -
Adu05g02337 418 CDD RPA1_DBD_A_like 56 121 - -
Adu05g02337 418 Gene3D - 190 338 IPR012340 -
Adu05g02337 418 SUPERFAMILY Nucleic acid-binding proteins 54 126 IPR012340 -
Adu05g02337 418 PANTHER BNAC07G49340D PROTEIN 250 331 - -
Adu05g02337 418 PANTHER BNAC07G49340D PROTEIN 61 145 - -
Adu05g02337 418 SUPERFAMILY Nucleic acid-binding proteins 198 334 IPR012340 -
Adu05g02337 418 CDD RPA1_DBD_C 196 335 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02337 Adu-Chr5 86749624 86754764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02337 205 317 Core DNA Replication Machinery Family AT5G61000 28.689 1.26e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02337 - - adu:107477146 457.603