Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02309 ATGGAGAAAGTGGTTGTGGAAAACCTTTGGAATGGTGACAGAGATGCACAAATTCAAGCAGCTATGGAGCTAAGTAGATTTAGTAGTAAGCAAAGGCACAAGTTGGAAGAAAGTGGAGTCTTGGTTCCTCTGGTTTCCATGCTTCATTCTGAAGACTATGAAGCCATTGAAGCTTCTCTCTGTGCTCTACTCAGTCTTGCATTCGGCAGCGAACGAAACAAGAGAAGGATCATCAAGTGTGGAGCTTTGCCAGTTCTGCTGAATCACCTTCACTCTCAAAGCCAAACAGTGGTGCAATTGACAGTAGCAGCCATGCTAACCCTCTCATCCTGCAAGGCAAATAAGGTTGCAATTGCTTCATCCGGTGCTCTACAACACTTGGCTGAATTTGTAAATAGCGGTGACATTCAGTTACAGCTTGATGTTGTGGCCACAATCCACAACCTCTCAACCTGCGAAGAGATTGTTCCATTGATCGTTGCTTCTGGCATTATACTTTCATTGATTGAACTGGTCCACAACTCTGTGAAATCATCTCCGCTGGGTGAAAAGGCGATTGGTTTGCTCGAAAATATTGTCTCTTCATCAGAGAGTGCACTTTGTGAGGCTGCTAGTGTTGGTGGGGCAATTCGGATACTGGTCGAGACTATTGAAGATGGATCATCACTAGGGTTAAGCATAGATGGAACGCGGAGAGCCAAGAACATGGCTCGAGAACTGTTGTTGCTTCTGAGGGATTACTCCGATTATAGTTCAAGACAAAAACAAATGAATCATGAGCTCATAGAGCGGATCATGGAAGAAATTGATGCAGATGGAGAGAAATTGGCTGATGCTAAGCTGCGTTTAGTGGAGGAGATGATTGCAAAGCTGAACACATAA 882 0.4433 MEKVVVENLWNGDRDAQIQAAMELSRFSSKQRHKLEESGVLVPLVSMLHSEDYEAIEASLCALLSLAFGSERNKRRIIKCGALPVLLNHLHSQSQTVVQLTVAAMLTLSSCKANKVAIASSGALQHLAEFVNSGDIQLQLDVVATIHNLSTCEEIVPLIVASGIILSLIELVHNSVKSSPLGEKAIGLLENIVSSSESALCEAASVGGAIRILVETIEDGSSLGLSIDGTRRAKNMARELLLLLRDYSDYSSRQKQMNHELIERIMEEIDADGEKLADAKLRLVEEMIAKLNT 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02309 293 Pfam Armadillo/beta-catenin-like repeat 113 150 IPR000225 GO:0005515
Adu05g02309 293 Pfam Armadillo/beta-catenin-like repeat 71 105 IPR000225 GO:0005515
Adu05g02309 293 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 123 IPR000225 GO:0005515
Adu05g02309 293 PANTHER U BOX DOMAIN-CONTAINING 1 222 - -
Adu05g02309 293 PANTHER U BOX DOMAIN-CONTAINING 223 273 - -
Adu05g02309 293 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 223 273 - -
Adu05g02309 293 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 222 - -
Adu05g02309 293 Gene3D - 3 257 IPR011989 -
Adu05g02309 293 SMART arm_5 70 110 IPR000225 GO:0005515
Adu05g02309 293 SMART arm_5 111 151 IPR000225 GO:0005515
Adu05g02309 293 SMART arm_5 152 194 IPR000225 GO:0005515
Adu05g02309 293 SMART arm_5 28 68 IPR000225 GO:0005515
Adu05g02309 293 SUPERFAMILY ARM repeat 4 222 IPR016024 -
Adu05g02309 293 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 163 198 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02309 Adu-Chr5 86361814 86363252 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02309 3 224 U-box Gene Family AT2G23140 31.111 1.02e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02309 - - gmx:100778534 404.445