Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02287 ATGGCTAGCTGGGTTATTGACATTGGAGGACTTGCAAAGAAAGTGAAGAATAATACATTGCCATTAGCTGATCAAATCAATGACTGTGGAGCATATTGTGAATGTCCAATATGTCATTATCACATTGATAACATTGATGTTTCTCCTGAGTGGCCAGGCTTTCCGGCCGGCGTGAAGTTTGATCCTTCCGACATAGAACTGTTAGAACATTTGGCAGCAAAATGTTGTGTTGGGAACAAAGTGCCTCATGCCTTTATCCAAGATTTCATCCCAACACTAGAAGGAGACCAAGGAATATGCTACACACATCCAGAAAATCTTCCAGGTGCTAAGAAAGATGGGGCCAGTGTTCATTTCTTTCACAAAACAACTAATGCATATGCTACCGGACAACGAAAGCGTCGAAAGATTAATCATCAACTAGGCCTAAGTGAGGAGCATGTTCGCTGGCATAAGACCGGTAAGACCAAAGCTGTAACAGAAAATGGAGTACACAAGGGCTTCAAGAAGATCATGGTTCTTTACGTAAGGCCTAAGAGAGGAGCAAAGCCGAATAAATCGAAATGGGTGATGCATCAGTACCATCTAGGGAGTGAAGAAGGTGAGAAGGAAGGTGAATATGTGGTTTCAAAGATTTTCTATCAGCAGCAGAAGAAAACTAAGAAGAATAAGCTGAATCCATTGGTGGCTGAAGATTCTGTCATGGCATTACAAGCAAGTCCAAGAACACCGAATCCAAATCCACCAAAACGGCCTCGGACAGGAAAATCTGTTGATTTTGAAGAAACTGACCTTATGCTATTCACTCAGGGTGGAAAGCCTACTATTCATGGAGAATCACTTGAACCACCACCATCTGAAGTTCATGGTGATGAAAATAATGGAGGCTTTAACAACACTGCATTGTTATCTGTTGAAACACAACCTGTCAACTCTGACTTTATTGGATTGGATGATATCTTACTATGCAAGGAACAGACATTAGATTCTTCTTCTGCTCACCTAAATGATTCGGGTTTGAAGTCCAACAATCTGAAAGGCTTTGCTTGCAATGCAAATGGAAATGCAGGTGAATTGTTTGGGGATGTGAATGATTGTTATGGAATTTCAGTGCTGGATAACCTGGGACTGGACAGTCCTCCCGATTTTGATCTTTCTGTAAGCACTCGATCACCCTTGTCGTCGTAG 1188 0.4184 MASWVIDIGGLAKKVKNNTLPLADQINDCGAYCECPICHYHIDNIDVSPEWPGFPAGVKFDPSDIELLEHLAAKCCVGNKVPHAFIQDFIPTLEGDQGICYTHPENLPGAKKDGASVHFFHKTTNAYATGQRKRRKINHQLGLSEEHVRWHKTGKTKAVTENGVHKGFKKIMVLYVRPKRGAKPNKSKWVMHQYHLGSEEGEKEGEYVVSKIFYQQQKKTKKNKLNPLVAEDSVMALQASPRTPNPNPPKRPRTGKSVDFEETDLMLFTQGGKPTIHGESLEPPPSEVHGDENNGGFNNTALLSVETQPVNSDFIGLDDILLCKEQTLDSSSAHLNDSGLKSNNLKGFACNANGNAGELFGDVNDCYGISVLDNLGLDSPPDFDLSVSTRSPLSS 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02287 395 Pfam No apical meristem (NAM) protein 55 196 IPR003441 GO:0003677|GO:0006355
Adu05g02287 395 ProSiteProfiles NAC domain profile. 54 215 IPR003441 GO:0003677|GO:0006355
Adu05g02287 395 Gene3D NAC domain 63 221 IPR036093 GO:0003677|GO:0006355
Adu05g02287 395 SUPERFAMILY NAC domain 39 215 IPR036093 GO:0003677|GO:0006355
Adu05g02287 395 MobiDBLite consensus disorder prediction 237 257 - -
Adu05g02287 395 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 387 IPR044799 GO:0003700
Adu05g02287 395 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 3 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02287 Adu-Chr5 86011384 86015242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02287 35 219 NAC Transcription Factor Family AT1G28470 53.646 1.63e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu05g02287 NAM 6.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02287 - - ahf:112799760 556.214