Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02280 ATGGCGAAATCATTCTCTCTAACCCACCACCTTTCCCTCCTACTCCTCCATTCCCATTCTCACCGTCTCTTCATCCCCTCCACGACACTCCTCCCTCTCCCTCTTCATCACCATCACCCCTTCTCTCTCTCCCCATTCCACAAATCCCTCTCTACCAATCCCACCCCATACCCTCTTCAATACGAACTCATCATAAATCGCCCCGTTCAAAAACACCCACCACGTGTTCGACGAAATGCCGCACAAGCTCTCTCTGAACCCCACGAACCAGACGAACCTGAGGAACAAGAACCGACTTCGGAGCTTCGCCTTGACAGCTGGGTCGACCGGAAATTGAGCTTTGACTCCGATTCTGGTCAACCCAGTTCGTCAAATTTGGAACTTGACAAGGCCAAGAGGAAGTACTACAACAAGAGAAGGAAGAGGATGTACGGGTCAGATTCCGAGGAAGAAGAGGCACGGTTACGGAACGAGGAGAAGTTTGTGGAGCTGAAGCCTGAGGTGGTGGAGCTTCCAACTCTGCACCGTAGAGAAGAAGAGTTGTATTTTTATGATGCTTTTGCTTACCCTTGGGAGAAGGAGAAGCACTACAAGATGGTGTATCAGTTGGAGAAGAAGTACTTCCCTAATCAATGCCTTGACAAGGCATTTCTCAAACCGGGAGAGTCGAATTTGAATGCGAATGCAAATGCAAATTTAAATGAAAATGAAAATGTAGATGGTGGTGTGAGGAGCAAGGGGAAGGGTAGGAAGACTGCTGGTGTTAGGGAGGAGAAGAAGGATGATAAGGGTGATAACAAGTTGGTCTTTTTTGATGAGAAGAGGGAAGAGGAAAAGAAGGGTGATGGGGACTTGGTGAAGGATCTTAGGGAGAAGAAGGTCGAGGAATTCTTCAAGGGCTTGAAGAGAGTTGACAAAAAGGATGGTGAAGTTAGTAGTATCAATGCAGAGCCTTTTCTTTCATCGAGGAGGACTGGACTCCCCCCGGTATGGGACAGTCCACATGGCACTGTGGTTTTTATTAACAAACCAAAGGGCTGGACCTCATTCACAGTTTGTGGTAAGCTGCGCCGCGTTGTTAAAGTAAAAAAGGTAGGCCATGCTGGAACACTTGATCCCATGGCTACTGGTTTATTGATTGTTTGTGTTGGAAAAGCAACAAAACTGGTAGACAGATATCAAGGGATGATCAAGGGTTATAGTGGGGTCTTCCGTCTAGGGGAGGCTACTTCAACATGGGATGCTGATTCACCAGTCATTCAGCGTGAGCCATGGGAACACATCAAAGATGAGGACATAAAGAGAAACACACATAACTTTATGTTTTGA 1329 0.4703 MAKSFSLTHHLSLLLLHSHSHRLFIPSTTLLPLPLHHHHPFSLSPFHKSLSTNPTPYPLQYELIINRPVQKHPPRVRRNAAQALSEPHEPDEPEEQEPTSELRLDSWVDRKLSFDSDSGQPSSSNLELDKAKRKYYNKRRKRMYGSDSEEEEARLRNEEKFVELKPEVVELPTLHRREEELYFYDAFAYPWEKEKHYKMVYQLEKKYFPNQCLDKAFLKPGESNLNANANANLNENENVDGGVRSKGKGRKTAGVREEKKDDKGDNKLVFFDEKREEEKKGDGDLVKDLREKKVEEFFKGLKRVDKKDGEVSSINAEPFLSSRRTGLPPVWDSPHGTVVFINKPKGWTSFTVCGKLRRVVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIKRNTHNFMF 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02280 442 MobiDBLite consensus disorder prediction 70 102 - -
Adu05g02280 442 Gene3D Pseudouridine synthase 332 441 - -
Adu05g02280 442 Pfam TruB family pseudouridylate synthase (N terminal domain) 357 440 IPR002501 GO:0006396
Adu05g02280 442 MobiDBLite consensus disorder prediction 228 261 - -
Adu05g02280 442 MobiDBLite consensus disorder prediction 241 261 - -
Adu05g02280 442 SUPERFAMILY Pseudouridine synthase 337 440 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Adu05g02280 442 PANTHER TRNA-PSEUDOURIDINE SYNTHASE 315 440 IPR014780 GO:0001522|GO:0003723|GO:0009451|GO:0009982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02280 Adu-Chr5 85943368 85945998 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02280 338 410 NAC Transcription Factor Family AT3G57150 45.205 2.30e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02280 K03177 - zju:107415230 469.929