Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02257 ATGTCTTCAGGATCATCAAGTAGTGCCGATAATAATGCATGGACTGTTGAGGAGAACAAAGCTTTTGAAAGGGCAATAGCTGCATATGACAAGAACAATTCTGAACGTTGGAACAATGTTGCTAAGGTTGTTGGCAATGGAAAAACTGCAGAACAAGAGAAGAAGCACTATGAGCTCCTTGTCCAAGACATTCAACTTATTGAGTCCGGCCAAATTCCATTTCCAAAATATAGGTCAGGGGGTAATTAA 249 0.4016 MSSGSSSSADNNAWTVEENKAFERAIAAYDKNNSERWNNVAKVVGNGKTAEQEKKHYELLVQDIQLIESGQIPFPKYRSGGN 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02257 82 CDD SANT 13 61 IPR001005 -
Adu05g02257 82 ProSiteProfiles Myb-like domain profile. 6 61 IPR001005 -
Adu05g02257 82 Gene3D - 5 74 - -
Adu05g02257 82 SMART sant 10 63 IPR001005 -
Adu05g02257 82 SUPERFAMILY Homeodomain-like 12 69 IPR009057 -
Adu05g02257 82 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 80 IPR044636 GO:0003700
Adu05g02257 82 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 80 - -
Adu05g02257 82 Pfam Myb-like DNA-binding domain 12 57 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02257 Adu-Chr5 85601215 85601463 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu05g02257 Myb_DNA-binding 5.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02257 - - mus:103976638 107.457