Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02178 ATGGATTTGAGCTCTAAATCCTACAAATGGAAGTATGATGTATTCTTGAGCTTTAGAGGGGATGATACACGTAGGAGTTTCACAAGCCATCTTTATCATTCTCTTTGCCAAAAGGGTGTCAATACTTTCATAGACTACAAGGATCTCATAAAGGGAGAGCAGATAACACCTTCACTTCTTAGGGCTATTGAAGCCTCAAGGATCTCAGTCGTTGTATTATCTGAAAACTATGCATCTTCCACTTCTTGCTTGGATGAACTCCTTAAGATCATTGAGTGCAAGGACACTAAGGGTCAGCTGGTTTTGCCGGTCTTTTATGGTGTGAATCCATCTCAAGTAAGAGAACAGAAGGGAAGTTTTGCAGAAGATTTGGCCAAACATGAAGACAAGTTCAGGGATGATGTCAACAAAGTAAAAAGGTGGAGGGCAGCACTATGTGAGGCTTCTACTTTGTCTGGGTGGCACATGGGTGACGGGCAAGAATCAAAATTTGTCCAGAGAATTGTTGAGGAGATATTGAGTAAGTTGAACCGCACACCTTTCAATGTTGCTAAGCATCCTGTTGGATTGGATTCACCTATTGAAGATATTAAAACACTTTTAGATACTGGATCAGATGATGTACAGGCTATAGGAATTTATGGAATTGGAGGTATAGGGAAAACAACACTTGCTAAGGCTGTTTATAACCATATTGCTAACCAGTTTGAGGGTAGTGCTTTCATTGCAAATGTTAGAGAAATTTCAAGTCAAAGATCTGGGTTAGTTCAACTACAAGAAGCTCTTCTTTCTGAGAATTTGAACCACAGATATTGTAAAgaaatggctaaagaaattgtgcgtcttgaatcccccaatgatcctagtaaacgtagcagattatggtttcatgaggatgttcttcatgtattaaaacacaataagGGAAGTAACAACATTGAAGGCATAAGGCTAGATATACCAGAATCAGAGACAGACTACATAGAGGCCAAGGCCTTGTCAAGGATGAATAGACTCAGAATTCTTATTATCAACAATGTGCATGTTACAGATGATATCCAGTATCTACCTGATGAGCTAAGAATTCTTATTATCAACAATATGCATGTTACAGATGATATCCAGTATCTACCTGATACGCTAAGATTGATTAATTGGCCAAGATACCCTTCTTCAACTCTACCACCAAATTTCTATCCAAGGAGGCTTGTCTGTCTAAATATGAGTCATAGCCGCATCAAGCAGTTGTGGAAGGGAGTTAAGATATTCAGAGACTTGAAACTTGTGTCTTTTAGCAGCTGTGAACACCTCAAAGAAATTCCAGACTTCTCAATGGTTCCAAACCTAGAAAGCCTAAGCCTAGACAACTGTAGAAGCTTAATTAAGGTGCATGTGTCTGTGGGAACTCTTGATAAGCTTGTTACTTTAAACCTTCTATTTTGCTCCAATCTCAAGACCTTTCCAAGTCGTTTCATGCTAAAATCACTCCGTACTCTCCTCCTCACTGGCTGCTCAAAACTAAAAAAGTTTCCAGAGATTGTGGGGAACATGGAACATCTTGAAGAAATCCTTCTCCAAAGAACAGCAATAAAAGAACTACCTGAGTCGATTGAATATCTAAGCGGGCTGAAGTTCTTATTCTTAGAGTCTTGCCAGAGTCTTGAGCATCTCCCTAGTAGCCTTCAGAAGTTGCAAAACCTTACTACTCTTGATCTAAGTGGCTGCTCTAAGCTTCAAAAGATTCCGAAGCTACCCCCAAATACAAGATATATAGACTTGAGTAATTGTAGATCTTTGACAAGCTTTCCAACATTATCCAGCATATCAAATTTTATTGCAGAGGATTTTCCAAGGTTTTATCAAATTAGATTTGTTAACTGCCATAAACTGATAAATAAACAAGTCCTAGAGCATATAACAAATCTCTTCGGTAGTAAGGATATGATGCTTCCAGAATATATTTCTTGTGAATTTGTACTTCCAGGGAGCAAGATCCCAGATTGGTTCCAATACCAGAGTACTAATTATTCCATTTATCTTGAGGTGTCTTCAAGTTTATATGGTAAGCCCTTGGAGGTATTTTTTGGCGCAGTTTTTGAGTTGGATAAAGGTGTTACTACAACTGGCATGTTTACAGGTGAATTTGATCTTATTGTCAATGATACAAAGTTAAATATGTTTGCAACCCATTTTGAGGCACTGGACTCGAGTCATGTGTGGTTGGCTCGGTTGAAACTTGATCATTTTATGTGGCACCTTAAAAATATGCGTCAATGGAATCACTTTCAGATTTCATTTTCAATCTTTGAAACATCATCAAAGGAGAAGATAGGAGCAACCTTAAAGAGTTGTGGTTTCCATGTTTGGTCCAATCAAGAAGGGTATGTGATTGATCATACAACAGTTAGGAAGTCCACAGGGTTTTAA 2427 0.3684 MDLSSKSYKWKYDVFLSFRGDDTRRSFTSHLYHSLCQKGVNTFIDYKDLIKGEQITPSLLRAIEASRISVVVLSENYASSTSCLDELLKIIECKDTKGQLVLPVFYGVNPSQVREQKGSFAEDLAKHEDKFRDDVNKVKRWRAALCEASTLSGWHMGDGQESKFVQRIVEEILSKLNRTPFNVAKHPVGLDSPIEDIKTLLDTGSDDVQAIGIYGIGGIGKTTLAKAVYNHIANQFEGSAFIANVREISSQRSGLVQLQEALLSENLNHRYCKEMAKEIVRLESPNDPSKRSRLWFHEDVLHVLKHNKGSNNIEGIRLDIPESETDYIEAKALSRMNRLRILIINNVHVTDDIQYLPDELRILIINNMHVTDDIQYLPDTLRLINWPRYPSSTLPPNFYPRRLVCLNMSHSRIKQLWKGVKIFRDLKLVSFSSCEHLKEIPDFSMVPNLESLSLDNCRSLIKVHVSVGTLDKLVTLNLLFCSNLKTFPSRFMLKSLRTLLLTGCSKLKKFPEIVGNMEHLEEILLQRTAIKELPESIEYLSGLKFLFLESCQSLEHLPSSLQKLQNLTTLDLSGCSKLQKIPKLPPNTRYIDLSNCRSLTSFPTLSSISNFIAEDFPRFYQIRFVNCHKLINKQVLEHITNLFGSKDMMLPEYISCEFVLPGSKIPDWFQYQSTNYSIYLEVSSSLYGKPLEVFFGAVFELDKGVTTTGMFTGEFDLIVNDTKLNMFATHFEALDSSHVWLARLKLDHFMWHLKNMRQWNHFQISFSIFETSSKEKIGATLKSCGFHVWSNQEGYVIDHTTVRKSTGF 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02178 808 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 269 - -
Adu05g02178 808 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 273 490 - -
Adu05g02178 808 Pfam C-JID domain 660 789 IPR045344 -
Adu05g02178 808 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 154 IPR035897 -
Adu05g02178 808 Gene3D Ribonuclease Inhibitor 379 485 IPR032675 -
Adu05g02178 808 SMART till_3 11 151 IPR000157 GO:0007165
Adu05g02178 808 Gene3D Ribonuclease Inhibitor 489 643 IPR032675 -
Adu05g02178 808 Gene3D - 179 375 IPR027417 -
Adu05g02178 808 ProSiteProfiles TIR domain profile. 10 176 IPR000157 GO:0007165
Adu05g02178 808 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 269 IPR044974 GO:0006952
Adu05g02178 808 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 273 490 IPR044974 GO:0006952
Adu05g02178 808 PRINTS Disease resistance protein signature 210 225 - -
Adu05g02178 808 PRINTS Disease resistance protein signature 562 578 - -
Adu05g02178 808 SUPERFAMILY L domain-like 332 625 - -
Adu05g02178 808 Gene3D - 8 178 IPR035897 -
Adu05g02178 808 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 273 IPR027417 -
Adu05g02178 808 Pfam NB-ARC domain 193 251 IPR002182 GO:0043531
Adu05g02178 808 Pfam TIR domain 11 180 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02178 Adu-Chr5 84458180 84462058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02178 230 615 WRKY Transcription Factor Family AT4G12020 35.013 1.98e-47 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02178 - - ahf:112749316 701.819