Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02103 ATGGAAGAGAAAGAGAAATTAGATAGTTACAAAGTTGGATCTTTGCCTACTGTAATATATATACCTGATTTCATCACAGATAGTGAACAAAGCTTTCTTCTTAGCAATATATATGGAGCCCCTGCATCAAAGTGGAAGTTGTTGAAGAATAGGAGGTTACAGAATTGGGGTGGCGTTGTCCATGAGAAGGGCCTTCTACCTCAACCATTGCCTCCATGGTTAACAAATCTTACACAAAAGATATCAGAAGAATCAAGACTATTTCCATCAGCAATCAATCATGTTCTCATTAATGAGTACTTACCTAACCAAGGCATAATGCCACATCAAGATGGTCCAGCTTACTTTCCAGTTGTAGCTATTCTTTCACTCGGATCGCCTGTCGTCATGGACTTTACACCTCATGCTAGATTTAAACTAGATCCGCAAGATGTTAATGGCAAAGATTCTGATGGAGGAGAAGATAAAAGGCTTGATGATGATTACCTCCCATTCTCTGTTCTATTGATGCCTCGCAGTCTACTGATATTCAAGGATAAGGCATACTCAGATTATTTGCATGGTATTAAAGATTGTGCGGTACAATGCTATGATGGGGCTGTAAATGAAATGGAAGCTTTGAAACACAATGAATCAGATAGACCCTATTTTGGCTCAGAGGAATCAGTGGAAACAATGGGGAAGGAAGAGAGATTGGACTTTGGGGAAAAGCAGAAATTGCCACACGTGTATCAACCAACTGAAACTGACGCAAAGCGTGTTATTGAAGAAATTGAACAAGTCTTATATGAAGAAATTGAACAAGTCTTTCCTTCATCAGATTTCATGCATACGATGAAAAAGAATTCTGACCTTAGTGAGATTGGATCTGTATTCAACAACTTGGCTAAGCAGCTTGAGGAACCTGTTGACTTTGAGCTTCCAGATTCGTTTACCAAGAATAAACCTGTGCAGTATAGATCCATAAAGCGCAATATATATACTTCAAAGAAGTTTAAGAGACGGTTTGATGATGGCATATTCTGTTCTTGTACTCCTTCACCTGAATCTCCGAATGTGTGTGGTATTGATTGCCACTGTGGGGTGCTTTTATCTTGCTGTTCTTCAGCCTGTAAATGTGGGAGCTCCTGTCTCAACAAACCATTTCAGCATCGTCGGGTGAAAAAGATGAAATTAGTTCAGACTGAGAAATGTGGCTCTGGTATTGTAGCTGCTGAAGATATTAAGCTTGGGGAGTTTGTTATAGAATATGTTGGAGAAGTAATTGATGACAAAACATGTGAAGAAAGACTTTGGAACATGAAGCATCGTGGGGATTCAAACTTTTACTTATGTGAAATCAATCGAGATACTGTGATTGATGCCACATATAAGGGAAACAAATCTAGATATATCAATCATAGTTGCTGTCCCAATACAGAGATGCAGAAATGGATAGCAGATGGTGAAACCAGAATAGCCATTTTTGCTACACGAGACATTCAAAAGGGTGAACAACTCACCTACGATTACCGGTTTGTCCAATTTGGCGCAGACCAAGAATGTCACTGCGGTGCTGTTGCCTGCAGGCGTAAGCTTGGTGTCCAACCTACAAAGCCTAAAATGTCAGTTAAATGTCAGGTATATCAGAATGGAGGTTTGCAAATTGGCAGTTCTCAAGTTTTTGCGCAATCAAAAAGCTTAAAAGTTTGCATTGGGGAAGTTATTAGGATAAAACACCTTGAACATGTGAGGTTTGGGCTTATTAAATGGTTTAACAAATATTCCCGAAAACACTTGATCCTGTTTGAAGATGGCTGTGTTGAAATTTTTGACATGTCTAAAGAAGATTGGGAACTCACTACTAAATCCCTCACTTTGCTCGCCGCACTCACTCAGTCACTCTCTTCTCCAAGCTCTCTTCGCGTTTCGTTCATCCCTTGCCGTCGTCCGTCCCTCGCCGCCGTTTGCCATTCCCCAAACAGCTCGTCACTGTCTCCCTTTCTGCCGTTCTCTCACTCTCATTCTCTCATTCTGCTCTCTACTGTTGACTCTGTTCTGCATCAAAGCTCATGGACTCGTGGAGCCTCTGCCGTCAACACGCTGCCGTCGTTTGTCGCGTCCTCTGCTGGTTCATCGTGTACACTGCCACCATTCGTTCTTGTCTGCCTGCACAGCACAACAACGCTTGGTTCCTCAACTGAGCCTACTCCATTCAGCCATTCAGATTCAGGTGTGTAG 2220 0.4167 MEEKEKLDSYKVGSLPTVIYIPDFITDSEQSFLLSNIYGAPASKWKLLKNRRLQNWGGVVHEKGLLPQPLPPWLTNLTQKISEESRLFPSAINHVLINEYLPNQGIMPHQDGPAYFPVVAILSLGSPVVMDFTPHARFKLDPQDVNGKDSDGGEDKRLDDDYLPFSVLLMPRSLLIFKDKAYSDYLHGIKDCAVQCYDGAVNEMEALKHNESDRPYFGSEESVETMGKEERLDFGEKQKLPHVYQPTETDAKRVIEEIEQVLYEEIEQVFPSSDFMHTMKKNSDLSEIGSVFNNLAKQLEEPVDFELPDSFTKNKPVQYRSIKRNIYTSKKFKRRFDDGIFCSCTPSPESPNVCGIDCHCGVLLSCCSSACKCGSSCLNKPFQHRRVKKMKLVQTEKCGSGIVAAEDIKLGEFVIEYVGEVIDDKTCEERLWNMKHRGDSNFYLCEINRDTVIDATYKGNKSRYINHSCCPNTEMQKWIADGETRIAIFATRDIQKGEQLTYDYRFVQFGADQECHCGAVACRRKLGVQPTKPKMSVKCQVYQNGGLQIGSSQVFAQSKSLKVCIGEVIRIKHLEHVRFGLIKWFNKYSRKHLILFEDGCVEIFDMSKEDWELTTKSLTLLAALTQSLSSPSSLRVSFIPCRRPSLAAVCHSPNSSSLSPFLPFSHSHSLILLSTVDSVLHQSSWTRGASAVNTLPSFVASSAGSSCTLPPFVLVCLHSTTTLGSSTEPTPFSHSDSGV 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02103 739 SUPERFAMILY SET domain 300 517 IPR046341 -
Adu05g02103 739 SMART PostSET_3 511 527 IPR003616 -
Adu05g02103 739 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3 281 614 - -
Adu05g02103 739 Pfam SET domain 399 504 IPR001214 GO:0005515
Adu05g02103 739 Gene3D - 8 214 IPR037151 -
Adu05g02103 739 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 283 558 IPR025787 -
Adu05g02103 739 ProSiteProfiles Post-SET domain profile. 511 527 IPR003616 -
Adu05g02103 739 SMART shorttest3 337 387 IPR006560 GO:0005634|GO:0018024
Adu05g02103 739 ProSiteProfiles AWS domain profile. 337 386 IPR006560 GO:0005634|GO:0018024
Adu05g02103 739 SUPERFAMILY Clavaminate synthase-like 16 194 - -
Adu05g02103 739 SMART set_7 388 511 IPR001214 GO:0005515
Adu05g02103 739 ProSiteProfiles SET domain profile. 388 505 IPR001214 GO:0005515
Adu05g02103 739 CDD SET_ASHR3-like 389 527 - -
Adu05g02103 739 Gene3D SET domain 295 543 IPR046341 -
Adu05g02103 739 Pfam 2OG-Fe(II) oxygenase superfamily 55 190 IPR027450 -
Adu05g02103 739 PANTHER SET DOMAIN PROTEINS 281 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02103 Adu-Chr5 82701586 82716457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02103 367 523 C2H2 Transcription Factor Family AT2G23740 36.158 3.95e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu05g02103 2OG-FeII_Oxy_2 8.5e-11 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02103 - - ahf:112751595 1120.15