Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02086 ATGGAGAACAAACAAGATGGTGTAAGCAATGGTGATGGGGATGTACTACATGACATTGAAAATGAAGGTGTATTGTTGGATGGGAAGGGCGAAATTCGGAGGAATTGGTCGGAGTTTTCGGAAAGGAACATGTCATATGCAGAGCCACTGCTTGTTAAAAGGACTAACACAACCTCCCAGATTGCTATAATTGGTGCCAACCTCAGCCCTATTGAAAGCCTTGATTATGAGATTTTTGAGAATGAAATTTTTAATCAGGATTGGAGGTCCAGGAAGAAAATTCAGATAATCCAGTATGTGATACTTAAGTGGGGATTTGCTCTTATTATTGGATTAGGCACTGGACTAGTTGGCCTCTTCAATAATATTTCAGTTGAGAACATTGCTGGTTTCAAGTTGCTTATGACAACCACTCTCATGACTCAACACAGATATGTTGAGGCTTTTGTAGCATATGCCGGTATCAATGTAGTTTTAGCAGCAGCAGCTGCTGCACTTTGTGCTTTCATTGCTCCAGCAGCAGCAGGCTCTGGTATTCCGGAGGTGAAAGCATATTTGAACGGCGTGGATGCGCATTCTATACTTGCTCCGAGCACTCTTTTTGTAAAGATTTTTGGTTCCGTCCTTGGAGTTTCTGCTGGATTTGTGGTAGGCAAAGAAGGACCTATGGTACATACAGGTGCATGCATAGCTAATTTATTGGGGCAAGGAGGATCTCGCAAGTACGGTTTAACTTGGAATTGGCTTAGATATTTCAAGAATGACAGGGACCGGCAAGACATGATTACTTGTGGCGCGGCTGCTGGTGTTGCTGCTGCCTTTCGCGCACCAGTAGGTGGGGTCCTCTTTGCCCTTGAAGAGGCAGCTTCATGGTGGAGGAGTGCTCTTTTGTGGAGGACATTTTTCACCACAGCAGTAGTTGCTATTGTTTTAAGAGCTGCAATTCAGTTTTGCGCCACCGGGAAATGCGGCTTATTCGGAGAAGGTGGTCTGATAATGTATGATGTTGGTTCTTCCAAGGTAACATACAGCGCCGGCGACGTACTAGCAGCAATACTATTGGGAGTCATTGGAGGAGTTCTTGGAAGTGTATATAACTACCTTGTGGATAAGGTTGTTCGGACATATAGCATCATCAATGAAAAAGGTGCAGTTTTCAAAATCATACTTGTTGTCACAATTGCTCTCTTGACATCATGTTGCTTTTATTTCCTACCATGGATTGCAACCTGCAAACCCTGCCCTACTAATGAATCGGTGATCTGTCCCTCGGTAGACGAAAATCTCTTCAGCTCTAGGATAACCAAGGAGTTTCATATTTCAAGCTTGTTCATCTACTTTGGCACTATCTTCTTTCTTGGGATAGCCACTTATGGTATTGCTGTTCCATCAGGCCTCTTCATTCCTGTTATCCTAGCCGGGGCTGCATACGGCCGGCTTGTTGGGAGACTATTCGAACCGATCGTTAAGCTGGACACAGGACTATTTGCACTGCTTGGAGCTGCATCCTTCCTTGGTGGCACAATGAGAATGACTGTCTCCATTTGTGTCATATTGCTTGAGCTCACGAATGACCTCTTATTACTTCCTCTTGTGATGCTGGTTTTATTGATATCAAAATCTGTGGCCGATGGCTTCAACAAGGGTGTCTATGACCAAATTCTGAAGATCAAAGGACTTCCTTATATGGAGTCTCATGCAGAACCTTATATGAGGACTTTGGCTGCGCGAGACGTTGTCTCGGGTCCATTAGTAACCTTCTCTGGCATAGAAAAGGTTGGGAATATACTTCATGCTTTGGAAACTACAGGACACAATGGTTTTCCTGTGATTGATGAACCACCTTTCTCAGATGCAGCAGAGTTGTGTGGACTTGTTCTGAGGTCTCATTTGCTAGTGTTGCTTAAGGGGAAGAACTTCACAAAGGATAGACTGTTCATGGGCCGTAGCATCTCGAAACGAATTTCTGCATTGGATTTTGCAAAGGCTGGATCAGGGAAGGGAATGAAACTAGAGGATCTTGATATCAATGAGGAAGAGAAGAACATGTATGTTGATCTTCATCCCATAACTAATGCATCACCGTACACAGTGCTCGAGACAATGTCACTTGCCAAAGCTGCCATTCTCTTCCGCCAACTCGGACTTAGGCACATGTGTGTTGTCCCAAAGAGCCAAGGGAGACCACCAGTTGTTGGGATTCTAACGCGCCACGACTTCATGCCGGAGCATATTTTGGGACTATACCCTGGAATCAATCCTCACAAAGAGGACTGA 2277 0.4449 MENKQDGVSNGDGDVLHDIENEGVLLDGKGEIRRNWSEFSERNMSYAEPLLVKRTNTTSQIAIIGANLSPIESLDYEIFENEIFNQDWRSRKKIQIIQYVILKWGFALIIGLGTGLVGLFNNISVENIAGFKLLMTTTLMTQHRYVEAFVAYAGINVVLAAAAAALCAFIAPAAAGSGIPEVKAYLNGVDAHSILAPSTLFVKIFGSVLGVSAGFVVGKEGPMVHTGACIANLLGQGGSRKYGLTWNWLRYFKNDRDRQDMITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAIVLRAAIQFCATGKCGLFGEGGLIMYDVGSSKVTYSAGDVLAAILLGVIGGVLGSVYNYLVDKVVRTYSIINEKGAVFKIILVVTIALLTSCCFYFLPWIATCKPCPTNESVICPSVDENLFSSRITKEFHISSLFIYFGTIFFLGIATYGIAVPSGLFIPVILAGAAYGRLVGRLFEPIVKLDTGLFALLGAASFLGGTMRMTVSICVILLELTNDLLLLPLVMLVLLISKSVADGFNKGVYDQILKIKGLPYMESHAEPYMRTLAARDVVSGPLVTFSGIEKVGNILHALETTGHNGFPVIDEPPFSDAAELCGLVLRSHLLVLLKGKNFTKDRLFMGRSISKRISALDFAKAGSGKGMKLEDLDINEEEKNMYVDLHPITNASPYTVLETMSLAKAAILFRQLGLRHMCVVPKSQGRPPVVGILTRHDFMPEHILGLYPGINPHKED 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02086 758 SMART cbs_1 583 636 IPR000644 -
Adu05g02086 758 SMART cbs_1 694 745 IPR000644 -
Adu05g02086 758 Pfam CBS domain 694 740 IPR000644 -
Adu05g02086 758 SUPERFAMILY Clc chloride channel 81 565 IPR014743 -
Adu05g02086 758 ProSiteProfiles CBS domain profile. 690 757 IPR000644 -
Adu05g02086 758 Gene3D Clc chloride channel 94 563 - -
Adu05g02086 758 PRINTS Chloride channel signature 203 222 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Adu05g02086 758 PRINTS Chloride channel signature 494 510 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Adu05g02086 758 PRINTS Chloride channel signature 512 531 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Adu05g02086 758 PRINTS Chloride channel signature 172 189 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Adu05g02086 758 PRINTS Chloride channel signature 462 482 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Adu05g02086 758 PRINTS Chloride channel signature 267 286 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Adu05g02086 758 PRINTS Chloride channel signature 550 564 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Adu05g02086 758 PRINTS Plant CLC chloride channel signature 288 296 IPR002251 GO:0005247|GO:0006821|GO:0016020
Adu05g02086 758 PRINTS Plant CLC chloride channel signature 77 85 IPR002251 GO:0005247|GO:0006821|GO:0016020
Adu05g02086 758 PRINTS Plant CLC chloride channel signature 320 327 IPR002251 GO:0005247|GO:0006821|GO:0016020
Adu05g02086 758 PRINTS Plant CLC chloride channel signature 302 312 IPR002251 GO:0005247|GO:0006821|GO:0016020
Adu05g02086 758 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 428 756 - -
Adu05g02086 758 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 37 427 - -
Adu05g02086 758 Pfam Voltage gated chloride channel 160 544 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Adu05g02086 758 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 428 756 - -
Adu05g02086 758 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 37 427 - -
Adu05g02086 758 CDD ClC_6_like 72 563 - -
Adu05g02086 758 CDD CBS_pair_voltage-gated_CLC_euk_bac 576 743 - -
Adu05g02086 758 SUPERFAMILY CBS-domain pair 566 741 IPR046342 -
Adu05g02086 758 Gene3D - 564 746 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02086 Adu-Chr5 82571481 82576165 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02086 17 756 Ion Channels AT5G49890 69.689 0.0 1051
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02086 K05016 - jre:108982434 1136.32