Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02082 ATGGTGGATAGGGATTCAAGCGGAGCACACATGTCAATAGCAGCTTCTTCCATGTTTCCTGGCTTTAGGTTCTGTCCCACTGACCATGAGTTGATCTCTTATTACCTCAGAAAAAAATTGGACGGTGACGAGGACAGTGTTCAGATTATTTCCGAGCTTGAACTTTGCACCTTTGAGCCTTGGGATTTGCCTGAAAAATCGTTCATTAAATCAAACGATGAGTGGTTTTTTTTCTCGCGACGAGGGAGAAAGTATCCTAATGGTTCACAAAATAAAAGGGCAACTAAACATGGGTATTGGAGGGTCACATGCAATGAACGACAGATAAAGTCTGGTCAAAATGTGATTGGTACCAAACGCACCTTGGTATTCCATGTCGGCCGAGCTCCTAAAGGCCAGAGAACTGAATGGATTATTCATGAGTACTGCATCAATGACAAATTTCAGGATTCTTTGGTGGTTTGTCGGCTCAAGAGAAACACAAAATTCCATGCGAGTGATAGTTCTAACAAAGCTTTACGCAAGAATCGTATTAACAAAGCTTCACGCAAGAATTGTTGTGGAGTCTCAGAAGAAGGAGTTACAGTTCAAAGGAGCACTTGTGTGCCTATTCAAGATAAAGAGGTTGGATGTAGTTCCAAGAAGGGTAACAATAATAATAGTTCTCCTTCTACTACTGCCCAAATTGAATCCAGTCGTATAGTTGCCAATGAAGCCAATCCCAAAGCTTCTTCCGGTCATTCTAAGGTGGTGGACGAAGTGGGTTATTATGCAGAGATCAACTTAGTTGATATCATCAACTTAGATGAAACAGCACTCTGA 822 0.4161 MVDRDSSGAHMSIAASSMFPGFRFCPTDHELISYYLRKKLDGDEDSVQIISELELCTFEPWDLPEKSFIKSNDEWFFFSRRGRKYPNGSQNKRATKHGYWRVTCNERQIKSGQNVIGTKRTLVFHVGRAPKGQRTEWIIHEYCINDKFQDSLVVCRLKRNTKFHASDSSNKALRKNRINKASRKNCCGVSEEGVTVQRSTCVPIQDKEVGCSSKKGNNNNSSPSTTAQIESSRIVANEANPKASSGHSKVVDEVGYYAEINLVDIINLDETAL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02082 273 Pfam No apical meristem (NAM) protein 20 143 IPR003441 GO:0003677|GO:0006355
Adu05g02082 273 Gene3D NAC domain 27 165 IPR036093 GO:0003677|GO:0006355
Adu05g02082 273 ProSiteProfiles NAC domain profile. 18 160 IPR003441 GO:0003677|GO:0006355
Adu05g02082 273 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 272 - -
Adu05g02082 273 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 12 272 - -
Adu05g02082 273 SUPERFAMILY NAC domain 10 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02082 Adu-Chr5 82476667 82478524 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02082 6 273 NAC Transcription Factor Family AT2G27300 49.254 2.37e-83 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu05g02082 NAM 3.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02082 - - aip:107641470 426.017