Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02057 ATGGAGTGCAATAAGGACGAGGCAAACAGAGCTAAAGAAATTGCAGAGAGGAAGTTTAATGCAAAGGATACTTTGGGTGCAAAGAAATTTGCTTTGAAAGCTCAAAATTTGTTTCCAGATCTTGAGGGCATTCCTCAGATGTTAGCAACACTTGATGTCTATATTTCTGCCGAGCGTAAAATAAATGGAGAAGCAGATTGGTATGGTGTACTCGGTGTTGACCCATTTGCCGATGATGATACAGTTAGGAAACAGTACAGGAAGCTAGCTCTTATGCTTCACCCTGATAAGAACAAGTCTGTTGGTGCAGATGGGGCCTTTAAACTTATTTCAGAGGCGTGGAGTTTACTATCAGATAAGTCTAGAAGGGCAGCATATGATGAGAAGAGAAAAACAAAAGCCGGGAAAGTTTCATCGAAGTTTGGAGGTTCATCAGCAGCAACAGGGGCTAATGGCAGTTACAATTTTGCTAAGACTGCCCCTTCAAGTGCAAGGACTCAGAAGAATACTGCGAAAGAACACTCCTCATCTTCTACCCATAAGCCAAAAGGAAATACATTTTGGACGGTTTGCCACAGATGCAAAATGCAGTATGAGTATCTACGAGTCTATCTTAACCTTAAACTCTTGTGTCCCAATTGCCATGAGGCATTTTTGGCTGTAGAAACTGCTCCTCCACCTTCAAGCGGTATTAGACCTGCAGCTTCATGGGACTTTTCACATCAGAAGAATCGTCAAGGACCTAATAAAAGCAAATCTCATACTGGAAAGAACATGGCAGCTCCAAACGTCGGGGCGGGGAAAAACCATAGCAATGCTGATTTCCAGTGGGCTCCATTCTCAAAAACATCTGGTGTTTCTAATGTTGGCGAGAACGTGAGGAGGCACAAGCAGCTACCAAAAGGGAAGAGGCCTTAA 918 0.4325 MECNKDEANRAKEIAERKFNAKDTLGAKKFALKAQNLFPDLEGIPQMLATLDVYISAERKINGEADWYGVLGVDPFADDDTVRKQYRKLALMLHPDKNKSVGADGAFKLISEAWSLLSDKSRRAAYDEKRKTKAGKVSSKFGGSSAATGANGSYNFAKTAPSSARTQKNTAKEHSSSSTHKPKGNTFWTVCHRCKMQYEYLRVYLNLKLLCPNCHEAFLAVETAPPPSSGIRPAASWDFSHQKNRQGPNKSKSHTGKNMAAPNVGAGKNHSNADFQWAPFSKTSGVSNVGENVRRHKQLPKGKRP 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02057 305 Pfam DnaJ domain 66 127 IPR001623 -
Adu05g02057 305 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Adu05g02057 305 MobiDBLite consensus disorder prediction 152 173 - -
Adu05g02057 305 PANTHER BNAC03G44070D PROTEIN 1 294 - -
Adu05g02057 305 Gene3D DnaJ domain 63 186 IPR036869 -
Adu05g02057 305 MobiDBLite consensus disorder prediction 239 258 - -
Adu05g02057 305 PANTHER BNAA04G14940D PROTEIN 1 294 - -
Adu05g02057 305 SUPERFAMILY Chaperone J-domain 59 126 IPR036869 -
Adu05g02057 305 SMART dnaj_3 65 122 IPR001623 -
Adu05g02057 305 CDD DnaJ 66 119 IPR001623 -
Adu05g02057 305 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Adu05g02057 305 PRINTS DnaJ domain signature 68 86 IPR001623 -
Adu05g02057 305 PRINTS DnaJ domain signature 102 122 IPR001623 -
Adu05g02057 305 PRINTS DnaJ domain signature 86 101 IPR001623 -
Adu05g02057 305 MobiDBLite consensus disorder prediction 274 291 - -
Adu05g02057 305 MobiDBLite consensus disorder prediction 226 305 - -
Adu05g02057 305 MobiDBLite consensus disorder prediction 152 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02057 Adu-Chr5 81992534 81993451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02057 4 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.468 2.76e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02057 - - ahf:112751648 585.489