Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g02039 ATGGAAAAAGAAGATATTTTTGGTTCCGGGCATGCGGTCAAGGCTGATGAGGCTCCAGGGGGCTTCCACGTGGCACCAAGAAGTGAAAATATACAGTTTTCTGCACCCACGGCGGAGCCACCGCAGCAGCCGGTGGTTCCGACCACGGCTATGGTGGCAGTAACACCGGCGACAGGGACGGATGGGAAGAAGAAGAGGGGGAGGCCTAGAAAGTATGGACCGGACGGCAAGTTGACGCCGGAGGCAGCAGCGAAGGCGTTGTCTCCGATGCCAATATCGGCGTCGATTCCGTTGACCGGAGAGTTCTCAGGGTGGAAAAAGGGTAGAGGAAAGGCTGTTGAATCAATGAAGAAGTCATATAAATTTTTTGAGTTTGAAAATGCTGGAGGACCAGGTAATGGAATTGCATACTCAGTTGGTGCCAACTTCACACCTCACATTCTTACAGTAAATGCTGGAGAGGATGTTACTATGAAGATTATGTCCTTTTCTCAGGACGGATCCCGCGCCATATGCATTCTCTCTGCCAATGGCACGATTTCAAATGTCACGCTCCGTCAACCAACCTCTTCCGGCGGCACTTTAACATATGAGGGACGGTTCGAGATTCTTTCCTTGTCTGGCTCATATATGCCAACCGAGAACGGATTCACAAGGAGCAGATCTGGTGGGATGAGTGTTTCTTTGGCAGGTCCAGATGGTCGAGTAATGGGAGGAGGACTTGCCGGTTTGCTGGTAGCTGCAGGTCCTGTGCAGGTTGTTGTTGGTAGTTTCATTCCAGGTCACCAGTTAGAACATAAACAAAAGAAGCAAAGGGTGGAACACCATATATCATCAACTATATCTGCTCCACTTAATGTTCCTACTATTTCTGCTGAAGAAATGAAGATAAGTCTTGGTGGAGTGAAGCCTTTCATGACACCCCCTTCGGTTCCTTTTCAAGTCGAAAACATTCCTCCTCCTCCTCCTCCTGCGTTTGTCAACGGCCAATGTTCTCTGAACTCATCTGGTGACGACGATGATGAAGAAGATGCCTCTTTGCATGAGAAAGAATCTAATCCTAGTCTTTCAGATCCTGCTGGAGTTGCATGCTAA 1095 0.4877 MEKEDIFGSGHAVKADEAPGGFHVAPRSENIQFSAPTAEPPQQPVVPTTAMVAVTPATGTDGKKKRGRPRKYGPDGKLTPEAAAKALSPMPISASIPLTGEFSGWKKGRGKAVESMKKSYKFFEFENAGGPGNGIAYSVGANFTPHILTVNAGEDVTMKIMSFSQDGSRAICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLSGSYMPTENGFTRSRSGGMSVSLAGPDGRVMGGGLAGLLVAAGPVQVVVGSFIPGHQLEHKQKKQRVEHHISSTISAPLNVPTISAEEMKISLGGVKPFMTPPSVPFQVENIPPPPPPAFVNGQCSLNSSGDDDDEEDASLHEKESNPSLSDPAGVAC 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g02039 364 ProSiteProfiles PPC domain profile profile. 140 283 IPR005175 -
Adu05g02039 364 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 7 320 - -
Adu05g02039 364 MobiDBLite consensus disorder prediction 313 327 - -
Adu05g02039 364 SUPERFAMILY AF0104/ALDC/Ptd012-like 142 261 - -
Adu05g02039 364 MobiDBLite consensus disorder prediction 313 364 - -
Adu05g02039 364 Pfam Plants and Prokaryotes Conserved (PCC) domain 145 258 IPR005175 -
Adu05g02039 364 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 7 320 IPR039605 GO:0003680
Adu05g02039 364 MobiDBLite consensus disorder prediction 1 77 - -
Adu05g02039 364 CDD DUF296 144 258 IPR005175 -
Adu05g02039 364 Gene3D - 145 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g02039 Adu-Chr5 81792518 81796908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g02039 53 271 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 63.274 5.81e-89 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g02039 - - adu:107489679 662.914