LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu05g01978	ATGGTCATAAACCAAGCTATTGGTGACGAGGAGGTAGATCCCGAGGTAGGAATGTGCTTCGGCACATTAGAAGATGCGCGTGCATATTATTACCGATATGCGGCTAGAACTGGATTTGTCGTCAAAATAAGAACCACCGGCTGGGAGACCATAAACGATCAGAGGGTGGTTGTTAATCAAGCTTTGCATTGTAACAGAGATGGATACCGCACATCCCGTGTAAAGGCACCCCAGAGAAGGAAAACAGTGGCCTCAACAAACTGCAAAGCCCGTTGCTATTTGGCATTAGATAAAATGACAGGGCAGTGGAGAATTTCTCGAGTAGAGGATTTTGTGGCTACTCCAGAGGTTGCTGCTATATTGCGTGGTGCCATGGACAGTGCTCGGGAGAAGCTCAGAGAACACAAGGAATTCGAGCATCAAGCTGCACATGTACCAAGTGCGATTTACTCACATACGCATGATGAGTGTCCCGTTAGCATGGATGAGCTACATGGCCCACGTCGTGTTCCTACGCGAGGTCGTCCAACTTCCACCAGACTTGGGGCAGATCTGGAAAAATCTATTAAGAAGAGGGCACGCAAAAACAAGAACACTCACAATCACAATAAGGGACCTAATGGTAATGCACAACCATCTCCTACAAATGTGGCAACTTCCTACAAAGATACACGACCGGCTTGTTCAGAAATGACAGACAATTTGGCTATGCACTCTGGCTCCTTCATATCACTATTGAATTCATTCCATAACGCTGAACAATTGTGTATGTATATCTAG	780	0.4603	MVINQAIGDEEVDPEVGMCFGTLEDARAYYYRYAARTGFVVKIRTTGWETINDQRVVVNQALHCNRDGYRTSRVKAPQRRKTVASTNCKARCYLALDKMTGQWRISRVEDFVATPEVAAILRGAMDSAREKLREHKEFEHQAAHVPSAIYSHTHDECPVSMDELHGPRRVPTRGRPTSTRLGADLEKSIKKRARKNKNTHNHNKGPNGNAQPSPTNVATSYKDTRPACSEMTDNLAMHSGSFISLLNSFHNAEQLCMYI	259

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu05g01978	259	MobiDBLite	consensus disorder prediction	161	221	-	-
	Adu05g01978	259	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN	9	110	-	-
	Adu05g01978	259	MobiDBLite	consensus disorder prediction	202	221	-	-
	Adu05g01978	259	Pfam	FAR1 DNA-binding domain	29	109	IPR004330	-
	Adu05g01978	259	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	9	110	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu05g01978	Adu-Chr5	74571490	74574436	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Adu05g01978		FAR1	1.4e-10	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu05g01978	-		K01807	adu:107493576	215.698