Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01960 ATGATCTTAAAGCCTTCAGAGTTGTCACCAGCATGTTCTTCCATACTTGCCCTTGGACTTCCCAATCATAAGGTGTTTGAAGATTCATTAGTTCTAAAACTTTCTGTAGTTTATTTCATGCCATTGGACTTTCTAAGTTTTATGCTAATATTTCTGTTATCTGCCCATGTCCAAAAAATTAATGTCTCAATTGGGCAAGACCCAGAGTCAAAATGTCTCATTGGTGTTCTTGACATATATGGCTTTGAAAGCTTTAAGAATAACAGTTTTGAGCAGTTTTGTATTAATTTCACAAATGAAAAGCTGCAGCAACATTTCAACCCGTCATATGATGCGTGGCGCCAGAGTTTAGATATCAGTTCGGGTCTTGAAGAATTGAAGGTGTAG 387 0.3695 MILKPSELSPACSSILALGLPNHKVFEDSLVLKLSVVYFMPLDFLSFMLIFLLSAHVQKINVSIGQDPESKCLIGVLDIYGFESFKNNSFEQFCINFTNEKLQQHFNPSYDAWRQSLDISSGLEELKV 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01960 128 PANTHER MYOSIN-16 56 107 - -
Adu05g01960 128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 117 IPR027417 -
Adu05g01960 128 Gene3D Kinesin motor domain 67 82 IPR036961 -
Adu05g01960 128 Gene3D Myosin VI head, motor domain, U50 subdomain 52 66 - -
Adu05g01960 128 Gene3D - 85 109 - -
Adu05g01960 128 ProSiteProfiles Myosin motor domain profile. 1 128 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu05g01960 128 Pfam Myosin head (motor domain) 55 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu05g01960 128 PANTHER MYOSIN 56 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01960 Adu-Chr5 71521378 71523239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01960 57 107 Myosins gene family AT1G04160 88.235 2.77e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01960 K10357 - ahf:112805813 135.191