Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01944 ATGGTTTTGCAGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGATGGGGCTGGTGATGATTTGTTTAAAGAGCTATGGAGGCTGTGCAGGGCCATTAATGGATGCCCCTCGTGTTCAAGACAGAGTTCTCTATTTCCCTCAGGGTCACATTGAATTGGTATGA 222 0.4234 MVLQIDEELLQEVVNMGFDRNQLVESLCNRIQNEMGLVMICLKSYGGCAGPLMDAPRVQDRVLYFPQGHIELV 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01944 73 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 4 27 IPR015940 -
Adu05g01944 73 CDD UBA_SnRK1_plant 5 34 - -
Adu05g01944 73 Pfam UBA/TS-N domain 5 34 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01944 Adu-Chr5 68341513 68342265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01944 45 73 B3 DNA Binding Superfamily AT5G62000 65.517 9.07e-09 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01944 K07198 - ahf:114925841 140.198