Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01937 GATGATCATGAGGGTGTTAGGAACGTGGATGATGACAACTTCATAGATGACACGGGGTTGGAAGCTGGTGGTTACTATGGCAGTGATGAACCTCGTTCTCCTGGTGATGATGCTCCCCAGGCAGAGGAAGGTGAAGAGGATGATGAAATTAAGGATCTTTTCAAGATAGGTAAGAAAAAGAAGAAGAATGAGAGAAGTCCTGCAGAAATAGCTTTATTAGTTGAGAACGTCATGGCTGAGCTTGAGGTCACAGCTGAAGAGGATGCTGAACTTAATAGACAGGGGAAGCCTGCCATTAATAAACTAAAGAAGTTGGATCTTCTAACAGAAGTCCTCTCGAAGAAACAGCTCCAATTAGAGTTTTTGGACCATGGAGTACTAACTTTGTTGAAGAATTGGCTTGAGCCACTTCCTGATGGAAGCTTGCCAAATATCAACATACGCACGGCAATTTTGAATATTTTAAATGATTTTCCTATTGACCTAGAGCAGTATGATAGAAGAGAACAGCTGAAGAAGAGTGGTCTTGGGAAGGTTGTGATCATGTTCTTATCGAAGTCTGACGAAGAAATCAATGTAAATAGAAAACTAGCTAAGGAACTGGTTGACAAATGGGTAAGTAATCTCAATATTTGTTTTATGTATTGCAATATGCTGAATTTGTACAGGCTGGCAAATAAAGTAGCAGGGATGGAATCTAGAGATGGTGATCTTGATTTGGAGTTTTCACAGCCTAGGTCTGGACGGTCTTCTTCAAGGCAACATGCATCAAGGCCAGAAGCAACACCTTTGGATTTTGTGATCCGTCCCCAGTCTAAAATTGATCCAGAAGAAGTTAGAGCGCGAGCAAAAGCTGCTGCACAAGATCAGCAGAGAATGAAGATGAATAAGAAGTTGCAGCAGTTGAGGGCACCAAAGAAGAAGCAGCTTCAAGCTACAAAACTAAGTGTGGAAGGTCGTGGCATGATCAAATATTTGTAG 981 0.4159 DDHEGVRNVDDDNFIDDTGLEAGGYYGSDEPRSPGDDAPQAEEGEEDDEIKDLFKIGKKKKKNERSPAEIALLVENVMAELEVTAEEDAELNRQGKPAINKLKKLDLLTEVLSKKQLQLEFLDHGVLTLLKNWLEPLPDGSLPNINIRTAILNILNDFPIDLEQYDRREQLKKSGLGKVVIMFLSKSDEEINVNRKLAKELVDKWVSNLNICFMYCNMLNLYRLANKVAGMESRDGDLDLEFSQPRSGRSSSRQHASRPEATPLDFVIRPQSKIDPEEVRARAKAAAQDQQRMKMNKKLQQLRAPKKKQLQATKLSVEGRGMIKYL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01937 326 MobiDBLite consensus disorder prediction 271 287 - -
Adu05g01937 326 Pfam TFIIS helical bundle-like domain 154 206 IPR017923 -
Adu05g01937 326 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 67 211 IPR035441 -
Adu05g01937 326 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 123 207 IPR035441 -
Adu05g01937 326 ProSiteProfiles TFIIS N-terminal domain profile. 128 212 IPR017923 -
Adu05g01937 326 PANTHER PROTEIN IWS1 HOMOLOG 1 1 326 - -
Adu05g01937 326 MobiDBLite consensus disorder prediction 1 52 - -
Adu05g01937 326 MobiDBLite consensus disorder prediction 244 258 - -
Adu05g01937 326 Coils Coil 74 94 - -
Adu05g01937 326 PANTHER PROTEIN IWS1 HOMOLOG 1 1 326 IPR044204 GO:0009742|GO:0032784
Adu05g01937 326 MobiDBLite consensus disorder prediction 239 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01937 Adu-Chr5 67386518 67388583 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Adu05g01937 Med26 2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01937 K17498 - gmx:100801805 513.842