Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01896 ATGGCTTCGTCGGCTCCATCAATGGAAAGAAGGGTTGCCGAGGATGAAGATACCACTAGGGGCGTGTGCGTCGCCGATGAAGCAGAAATGTCCGACGGAGTAAACCACAGAGTTGGATCGGTTGAGGGCGAACGCTCTGCAGGGATGGAGTCGGATGAGCACAACTTTCAGGAAGATGATACAGAACACGACCATCACGCAGAAGCCGATGTCGACAATGGGGATGCGGTTGAATTGGAAGACAGTTTGGATGGTGCCGGAGGAATGTTTGATAATTATGCAGAAGACGAGTTTTACGCCGTTGATTCCGTGGAGTCGATAGGTTGGATTAATTTTTTGAACTTGAGCAAGGAGGATGTTCTCCGATTTAATTTTGCTGATGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTCGGCGCGAGACGTTCCAGAAGCGAAAAACGCGGTGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCCCGAAGTTCTACACGATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGACGATGAATCAGGACGTTGCCATGTTGCCTACTTTTCAGACGCGCATAACCACCACGCTCTTGAGTTGCAATTTTCTTCCATGCTCCTGAGCCATCGGAGGATGAGCGAAGCGGACATCGAGCAGATGAGCGACATGCGCAAAGGGGGCATTGGCGTCTCCCGAATCTATGGTTTTATGGCGAGCCTGGCCGGCAGGTATCATAATGTCCCGTACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACGAAGGGAGGGTGGCCTAGATGTGGAATCGTGCCTAAGGTATCTCCGAGAGTGCAAGGCAAATGATCCAGCACTGTACTACAAGGAAGTTGTTGACGGTGAGGGCGTGTTGTAA 969 0.515 MASSAPSMERRVAEDEDTTRGVCVADEAEMSDGVNHRVGSVEGERSAGMESDEHNFQEDDTEHDHHAEADVDNGDAVELEDSLDGAGGMFDNYAEDEFYAVDSVESIGWINFLNLSKEDVLRFNFADVDIAFEFYQQYAKHHGFGARRSRSEKRGEVRIRQEFVCHRQGYRSPKFYTMPNRQKRPRAETRCGCPARMLLRMDDESGRCHVAYFSDAHNHHALELQFSSMLLSHRRMSEADIEQMSDMRKGGIGVSRIYGFMASLAGRYHNVPYTTRDMHNVNAKQRREGGLDVESCLRYLRECKANDPALYYKEVVDGEGVL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01896 322 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 62 250 - -
Adu05g01896 322 MobiDBLite consensus disorder prediction 9 23 - -
Adu05g01896 322 Pfam FAR1 DNA-binding domain 133 221 IPR004330 -
Adu05g01896 322 MobiDBLite consensus disorder prediction 46 73 - -
Adu05g01896 322 MobiDBLite consensus disorder prediction 1 74 - -
Adu05g01896 322 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 62 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01896 Adu-Chr5 58195173 58196281 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu05g01896 FAR1 1.5e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01896 - - adu:110279476 538.11