Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01879 ATGCAGCCACCATCGGCGGCCACGCCCTCGACGGCTGCGGCGAGTTCATGCCCTCCTCCTCCTCCAACCCCTCTGAGCCACGCTCCCTCACTTGCGCCGCATCGTGGTGGACTCAGCCTCAGCACAAGCCCAAGCACAACAAGCCCAAGCCCAAGCCCATCAGCAAGTCCAATTTCAAGCCCATCATCACCACCACCTGCCCCACTCTCTCACCACTTTCCTCCTCCTCCACCTCCTCCGTACTCCTCCTTCCACCACCATCACATGAATAATAATTCTCCATCTACCGTTGTTGTTCCCAACATGCTCTTATCCCTTGGAAATGCCGCATGCTCTTCCGGTTCTGGATTCAACCACCACCACCACCACCAGAAAGACTTGAACAGCTCGAAGAAGAGGCATAGGACCAAGTTCAGCAAGGAACAGAAGGAGAAGATGCTGAGATTCTCAGAGAAGCTTGGTTGGAGAATGCAGAGAGATGAAGATGGTTTGATTCAAGAGTTTTGCAACCAAATTGGGGTTTCTAGAGGGGTCTTCAAGGTTTGGATGCACAACAACAAGAACACCTTCTTCAGAAACAGGAACAACAACAACAACAACGATAATGCTTCTGCTGCAGAAAAGAATGGGAGTCTTAATGGTGTTGATAATGGTAACCATATCGATAACGATAATGATGATGATCATAATAATAATGATAATGGAAATGGTAATCAACACAGCAACAACACTAGTAGCAGCAACGATGACATTCACAGAGATTATTAA 768 0.4818 MQPPSAATPSTAAASSCPPPPPTPLSHAPSLAPHRGGLSLSTSPSTTSPSPSPSASPISSPSSPPPAPLSHHFPPPPPPPYSSFHHHHMNNNSPSTVVVPNMLLSLGNAACSSGSGFNHHHHHQKDLNSSKKRHRTKFSKEQKEKMLRFSEKLGWRMQRDEDGLIQEFCNQIGVSRGVFKVWMHNNKNTFFRNRNNNNNNDNASAAEKNGSLNGVDNGNHIDNDNDDDHNNNDNGNGNQHSNNTSSSNDDIHRDY 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01879 255 MobiDBLite consensus disorder prediction 113 143 - -
Adu05g01879 255 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 131 188 IPR006455 -
Adu05g01879 255 MobiDBLite consensus disorder prediction 191 255 - -
Adu05g01879 255 MobiDBLite consensus disorder prediction 50 83 - -
Adu05g01879 255 MobiDBLite consensus disorder prediction 124 139 - -
Adu05g01879 255 MobiDBLite consensus disorder prediction 191 219 - -
Adu05g01879 255 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 68 196 - -
Adu05g01879 255 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 6-LIKE 68 196 - -
Adu05g01879 255 Gene3D - 116 190 - -
Adu05g01879 255 MobiDBLite consensus disorder prediction 14 28 - -
Adu05g01879 255 SUPERFAMILY Homeodomain-like 118 190 IPR009057 -
Adu05g01879 255 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01879 Adu-Chr5 55484624 55485494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01879 67 206 ZF-HD Transcription Factor Family AT2G02540 36.184 2.28e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01879 - - ahf:112803563 267.314