Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01878 ATGTCGTGCCGTCGCCGTCCTCCAAAGCATCGTCACTGCCGTCGTCACAAGCAGTGCCGCCAGCCTCACAGTATCCTTCCCTCTCACTCGGTCTCTGTTTCAACCCTCTCTCAGCCGTTAACGATGTCGTTCAAGCACCGGGCTTATGTTCAACAATTAGAAATAAGCCGTTTGAAGCTCATGCAATTGGAGGAGGAGATTGTTAAAGCTAAAAAGCAGAGTATTTATATTGAAAACAATCCATTGGATGCTAGTTATATGGGATCTTCTGGATCATTAAACTCAATTGAATATGAAAATTGGATTGAAGAGCAACACAAACTGAATGAAGAACTCAGAAATGCATTCCAAACAAAAGCACATGATGAACAACTCAATCAACTTATCCAGACTCTGTTGAACCATTACTCAAATCTTTTCAAGATGAAATCAGATGCTGCAAAGGTTGATATATTCTACCTAATCAGTGGTATCCGGAGATCATCCGCAGAGCGCCTTTTCCTTTGGATCGAAGGATCTCGCCCTTTGCAGCTTCTATGTGTAATCTGA 549 0.4244 MSCRRRPPKHRHCRRHKQCRQPHSILPSHSVSVSTLSQPLTMSFKHRAYVQQLEISRLKLMQLEEEIVKAKKQSIYIENNPLDASYMGSSGSLNSIEYENWIEEQHKLNEELRNAFQTKAHDEQLNQLIQTLLNHYSNLFKMKSDAAKVDIFYLISGIRRSSAERLFLWIEGSRPLQLLCVI 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01878 182 ProSiteProfiles DOG1 domain profile. 91 182 IPR025422 GO:0006351|GO:0043565
Adu05g01878 182 MobiDBLite consensus disorder prediction 1 20 - -
Adu05g01878 182 PANTHER FACTOR TGA7, PUTATIVE-RELATED 45 182 - -
Adu05g01878 182 Coils Coil 98 118 - -
Adu05g01878 182 PANTHER TRANSCRIPTION FACTOR TGA9 45 182 - -
Adu05g01878 182 Pfam Seed dormancy control 110 180 IPR025422 GO:0006351|GO:0043565
Adu05g01878 182 Coils Coil 46 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01878 Adu-Chr5 55466034 55466941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01878 44 182 Calmodulin-binding Proteins AT1G22070 48.276 6.41e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01878 K14431 - ahf:112801615 222.631