Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01831 ATGCCCCCACCAACGTCAACTATTTCACACCATTCTCCTTATTCAATGGGAGTTTTCTACACAGACATGGGTTCTCTCTCGCTTCGCACGCTTTCATCATCAACTACTCTTTCTTCATCGCAAGAGAGAAGTAATTATTATGCCAAGGAAATGCATAACCATAATAATGACAATGGAAGAGGAACAACAACTTCAAGCTTATTTCCATTTCATCATCAGTTTATGAGGGATAGCCGTTCTAGAAATTTTCAAGAACACCCCTGTAATAATAAAGATTCTGATTATGATTCCAGGGAGGATGGCAATGAAAAATTCCACAACCATGAAGAAGCAGCAGCAGCAGCAGCAACTAATGAGTTCAATGATGATGAAGAGAACCCTAATGAGGAGAAGTATTGCATGATGAGTAGTGGGAAAGAGGTAAATAACAGTGAAAAGTCCAAAGTGTGTGCAAGAGGGCATTGGAGGCCTTCAGAAGATTCCAAGCTGAAGGAGCTTGTGGCTCTTCATGGCCCTCAGAACTGGAACCTCATTGCTCAGAATCTAGAAGGAAGATCAGGGAAGAGTTGTAGGTTGAGATGGTTCAACCAACTAGATCCAAGAATAAAGAAGAATCCATTCAGTGAAGAGGAGGAAGAGAGGCTAATGGAAGCACATAGAGTGTACGGTAAAAAATGGGCCATGATTGCAAGGCTATTTCCTGGCAGAACAGATAATGCTATCAAGAACCACTGGCATGTTATCATGGCCAGAAACTACAGGGAGCAAAAATCCTTTACTTCTAGGACCAATAGGAAAATCAGAAGATATAATACTAATAACCGTCAGAGCCTTCTCTTCAGTAGAAATAACATCACCACCAGTACTACTAGTGGTTATTATGGTGGTCAGTTTATTAATGGTTCAGCAACTATTACTCACATGGCTACTGCTTGTTGGAGACAACAACAAGATAATAATGAAGAGGACCCTAATGGCTTCTATAATCAACAACAGTTTCCTTTTGATTATTGTTTCTTCTCTGCTGGTAAGTGTTCTTTATTTCATTCATCATCTCATGTATCTCATGTATTATTGTAA 1080 0.3972 MPPPTSTISHHSPYSMGVFYTDMGSLSLRTLSSSTTLSSSQERSNYYAKEMHNHNNDNGRGTTTSSLFPFHHQFMRDSRSRNFQEHPCNNKDSDYDSREDGNEKFHNHEEAAAAAATNEFNDDEENPNEEKYCMMSSGKEVNNSEKSKVCARGHWRPSEDSKLKELVALHGPQNWNLIAQNLEGRSGKSCRLRWFNQLDPRIKKNPFSEEEEERLMEAHRVYGKKWAMIARLFPGRTDNAIKNHWHVIMARNYREQKSFTSRTNRKIRRYNTNNRQSLLFSRNNITTSTTSGYYGGQFINGSATITHMATACWRQQQDNNEEDPNGFYNQQQFPFDYCFFSAGKCSLFHSSSHVSHVLL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01831 359 ProSiteProfiles Myb-like domain profile. 199 249 IPR001005 -
Adu05g01831 359 SMART sant 203 251 IPR001005 -
Adu05g01831 359 SMART sant 151 200 IPR001005 -
Adu05g01831 359 CDD SANT 215 246 IPR001005 -
Adu05g01831 359 CDD SANT 155 196 IPR001005 -
Adu05g01831 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 199 253 IPR017930 -
Adu05g01831 359 PANTHER MYB PROTEIN-RELATED 16 279 - -
Adu05g01831 359 Gene3D - 152 203 - -
Adu05g01831 359 MobiDBLite consensus disorder prediction 78 103 - -
Adu05g01831 359 Pfam Myb-like DNA-binding domain 152 198 IPR001005 -
Adu05g01831 359 Pfam Myb-like DNA-binding domain 204 247 IPR001005 -
Adu05g01831 359 MobiDBLite consensus disorder prediction 111 130 - -
Adu05g01831 359 SUPERFAMILY Homeodomain-like 152 245 IPR009057 -
Adu05g01831 359 Gene3D - 205 280 - -
Adu05g01831 359 PANTHER MYB TRANSCRIPTION FACTOR 16 279 - -
Adu05g01831 359 ProSiteProfiles Myb-like domain profile. 152 198 IPR001005 -
Adu05g01831 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 147 198 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01831 Adu-Chr5 49565097 49566542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01831 139 258 MYB Transcription Factor Family AT1G69560 75.000 9.79e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu05g01831 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01831 K09422 - gmx:100789305 241.121