Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01829 ATGGGAAGAATCCTCGACATGCTCCCTGAGCTTCTCAACCGAGACCCCGCCACGGACCTCTATCCGATCCTCGATTTCTTCCTCAACGACGTTGGAATCCCTTACCCCGAGGCTCTTGATCTGCAGCGTGGAGGAGCAATTGAAGCCAACCCTAAAATTCCTGATGAAATTAGGGTTCGCCGGTTCGACTTCCCTCACGTGCCAGAACACTGTGCTACTCGTTTCGAGCGTGGAGGAGACGCTCGTTCCGAAGATCGAGTTCTTGAAATGCTCTTCGGAATCGGAGAGTTGAAGCGGTTTCCGCCGTATTTTAAATTTGGCTTGGAAGGGAGTATTAAGCCAAGGCATAAGGTGTTGGTTGAGAATGGGGTGAAACCACCGTTGCATCTTATATTGAAGGGTGATGATGGTGGGTTCTATGAAACACTGATTAATACCCGGTTAAGAAAGCTTGATGGAAGATTCTTCTCCCTTCACTCTTGGACTCACTCAACAAAGGTTGATGAGAGCTTGATTCTCTCTAACCATGCAATTTTCACCGTTCACAGCATGCTTTCTCATCAAATGGTGGTGGATGGAGAGTGGGTCGGCATGGCTTCATCGGACATAATTTTCGAGAAAATGTTGAAAGTGCAACGAAAGCTTGACATCTCGCTGTTGCTCGTGTCGCCCACCTCGTTGTCGCTCACGTCGCTCATCTTATCAGCTCACCTCTTTGGTTTCTTGCTTTTGCTCACCTCGCCGTTACTTACCTCTAGGGTAAGAACTCCTCGGCTCCTCCCTCACCCGCGTCTCTCTCCTTGCCACTGCGCGGTTCGTCTACTTTGTCTCTGTCGCCGGCTCGCCGCCAAAATCGTCTTTCTGCTCGCCTCTCCATTCATCCTTGCGACTGATGAGGAACTGAGAATGGGCCTCGCTTATAATGCAAAGAAAAATATTGTTTATGTTGCAGATATTGAAAACCATGCTTTGAGGTATGTGATAGGTCCAGAATAG 996 0.488 MGRILDMLPELLNRDPATDLYPILDFFLNDVGIPYPEALDLQRGGAIEANPKIPDEIRVRRFDFPHVPEHCATRFERGGDARSEDRVLEMLFGIGELKRFPPYFKFGLEGSIKPRHKVLVENGVKPPLHLILKGDDGGFYETLINTRLRKLDGRFFSLHSWTHSTKVDESLILSNHAIFTVHSMLSHQMVVDGEWVGMASSDIIFEKMLKVQRKLDISLLLVSPTSLSLTSLILSAHLFGFLLLLTSPLLTSRVRTPRLLPHPRLSPCHCAVRLLCLCRRLAAKIVFLLASPFILATDEELRMGLAYNAKKNIVYVADIENHALRYVIGPE 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01829 331 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 1 37 - -
Adu05g01829 331 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 89 152 - -
Adu05g01829 331 Pfam mTERF 89 137 IPR003690 GO:0003690|GO:0006355
Adu05g01829 331 PANTHER CGI-12 PROTEIN-RELATED 89 152 IPR003690 GO:0003690|GO:0006355
Adu05g01829 331 PANTHER CGI-12 PROTEIN-RELATED 1 37 IPR003690 GO:0003690|GO:0006355
Adu05g01829 331 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Adu05g01829 331 SMART mt_12 2 34 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01829 Adu-Chr5 48893011 48895394 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Adu05g01829 mTERF 3.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01829 K15032 - vvi:100247222 92.0485