LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu05g01803	ATGCCCCCTTTCACTTTTACTTTCATATGGAAGAAGATGCTTACTGCTTTAACTTTGGTGTATGTTGATTTTCGAGAGATAAAGCCATCAGATGGTGATTTTTTTGGAACAGACTCCGATGAAGAGTTCCCAAGAAGAGACAATCTAGATTTTTTAGATGACGATTCGGAGGCTGATAAAGATAGACCTCAAGATAAGAGAATAGCAGAGCTGTCACAGGAAGATATCATGCAACTTCAGTTTACAGATGAGGAAGCTGTTTATCGATTCTACAAGACTTATGCAATGATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGACGCGATAGCGATGGTTGCGTAATTATGTGCCAAATTATTTGCAATCGGGCGGGCTCAAGAAGGGAAGAGGTTGAAAAGCATGAAAGAATCTGGGACCACCGACCCCTAACTCGAAGTTTTTGTCGGGCGAGAATTCGTGCAAGAATAGATAGAAAAATTCATAAATGGAAGGTTGTTTCGTTGTATGAAGAGCACTCTCATGGATTAGTTGATCCACTCGACATTAGCATGATGCAGTTTCAGGTCATGTGGGGAGACATGGTAGCGAGGTATAACTTATCAAGTAACTCTTGGTTCGACCAAACCTACGAGTTGAGGTTGATAGATGTTGCATGTAAGAACTCAAGTGATTTTGTTGAAGCAATGAATGATGTTGTCAACACAATTACAAAAACTCAAAATCGAGGTGAAAATCCACGCAACGGTAATTTAGACGATAACTACGTTGTTGATCCATTGGTGGTGAAGACGCAAAAGGCAGGCAGTGTGAAAAATCAGCAAAAGATAGAAAAAGATAGGAACATCGGTGGTAGAATAGCAGCTAAATCGGCTTTTACTGATCAAGTGAAAACATCAAGTCCTGGTCCTAATATACCGATTTGTGCATCTACAAGTAACGAAGAGTTCGGGATGAATTCCAGACTAGCAGAGTCTCCTGTTGTGGCTCCTGAAACTGGAATGGCAGATTGA	1014	0.4112	MPPFTFTFIWKKMLTALTLVYVDFREIKPSDGDFFGTDSDEEFPRRDNLDFLDDDSEADKDRPQDKRIAELSQEDIMQLQFTDEEAVYRFYKTYAMMHGFAVRLDEVRRDSDGCVIMCQIICNRAGSRREEVEKHERIWDHRPLTRSFCRARIRARIDRKIHKWKVVSLYEEHSHGLVDPLDISMMQFQVMWGDMVARYNLSSNSWFDQTYELRLIDVACKNSSDFVEAMNDVVNTITKTQNRGENPRNGNLDDNYVVDPLVVKTQKAGSVKNQQKIEKDRNIGGRIAAKSAFTDQVKTSSPGPNIPICASTSNEEFGMNSRLAESPVVAPETGMAD	337

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu05g01803	337	Pfam	FAR1 DNA-binding domain	89	178	IPR004330	-
	Adu05g01803	337	MobiDBLite	consensus disorder prediction	35	64	-	-
	Adu05g01803	337	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	58	181	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu05g01803	Adu-Chr5	46994408	46997791	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Adu05g01803		FAR1	7.9e-15	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu05g01803	-		K17604	adu:107489293	342.428