Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01767 ATGGAATTGGAAGCTGATCATAATCACCATCACCATCACCATCAAAACGGAATCAGAACCAGACCTAATTTCCCTCTTCAGCTGTTGGAGAAGACTAAAGACGTCGAAGACTCAGTCGCGGAACAGCCATGCTCCACCGTCGCCGAACAACCCGGTGACGGAGCAGGCACCGCCGTCACTTTACAGGACCAGCAACAGAATACCACCAAGAAGCCGCCGCCAAAGCGGACCTCCACCAAGGACCGGCACACCAAGGTGGACGGCCGCGGCCGCCGGATCCGGATGCCGGCGGCCTGCGCCGCTCGCGTGTTCCAGTTGACGCGGGAGTTAGGGCACAAATCCGATGGCGAGACCATCGAGTGGCTACTACAGCAAGCGGAGCCGGCGGTGATCGCCGCAACCGGCACCGGCACCATCCCCGCCAACTTCACCTCGCTCAACATTTCGCTTCGGAGTTCCGGGTCTACCGTTTCGGCGCCGTCACACTACTTCAGAGGAAGCTACTTCAATCCTAGCACGTTCTCTTCGGCCGCCGTTGCGGCAGCTGTCGGCGGCGGAAGGATCCGCAGCGGAGCTGGCGATAATTGGGAGCGTAGCATGGGCATGAATATGAACATGAACATGAATATGAACATAGCAACGATGGAAGATTCTAGAAGGTTGTTGTTTCCAGGTTCATCGGAGAATTGTTCTAATTCCATGGGATTGAACTTCAACCCTAGCACCGTGAATGCCGTTCTCCAAGCAAAGCAAGAACTCCGTGAAGACGGCGCCGCCGCTGCTGGTGGTGGTGGAAATCTTGATTTGGATGGCGGTGATTGCGACGGAAACATGGCTAGAAAGAGAAGAATGGAACAAGAGGTTTCCGTTTCACACCAGATAGCAGGAAACTACTTGTTACAATCAAGTACCGCGGGTTCGGTTCCGGCGAGCCACGCTTCGAATCCCGCAACGTTTTGGATGGTGACTGGGCACCAAGGCATGAATGGTGGTGGCGGCGGCGGCGGCGGCGGTAGTAATAATGATCAAATTTGGGCAATTCCGTCACTGGGGAGTGGTGGTGGAGTTTATAGAGGGGGTATGCCTGGCGGTGTTGGTGGGATTCATTTCATGAATTTTGGTTCACCAATGTCTCTTATGCCTGGTGGACAACTAGGTTCCGCCATGGTCGGTGGCGGCAGCGGCGGTGGTGGAGCAATGCTGAGTGAAAGCAATAATTTAGGTATGCTTGCAGCACTTAATGCCTATAGGCAGATTCCGGCCAATGGCAGTGGCGTTTCGGAGTCTCCGGCAAGCACCGGAAACCACCAACATCACGGTGGAGATGATGGGCATGAAACAACAAGTCAACAGCAACATTCTTGA 1365 0.548 MELEADHNHHHHHHQNGIRTRPNFPLQLLEKTKDVEDSVAEQPCSTVAEQPGDGAGTAVTLQDQQQNTTKKPPPKRTSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTVSAPSHYFRGSYFNPSTFSSAAVAAAVGGGRIRSGAGDNWERSMGMNMNMNMNMNIATMEDSRRLLFPGSSENCSNSMGLNFNPSTVNAVLQAKQELREDGAAAAGGGGNLDLDGGDCDGNMARKRRMEQEVSVSHQIAGNYLLQSSTAGSVPASHASNPATFWMVTGHQGMNGGGGGGGGGSNNDQIWAIPSLGSGGGVYRGGMPGGVGGIHFMNFGSPMSLMPGGQLGSAMVGGGSGGGGAMLSESNNLGMLAALNAYRQIPANGSGVSESPASTGNHQHHGGDDGHETTSQQQHS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01767 454 MobiDBLite consensus disorder prediction 438 454 - -
Adu05g01767 454 ProSiteProfiles TCP domain profile. 79 133 IPR017887 -
Adu05g01767 454 MobiDBLite consensus disorder prediction 1 90 - -
Adu05g01767 454 MobiDBLite consensus disorder prediction 57 73 - -
Adu05g01767 454 MobiDBLite consensus disorder prediction 421 436 - -
Adu05g01767 454 Pfam TCP family transcription factor 77 181 IPR017887 -
Adu05g01767 454 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 15 451 - -
Adu05g01767 454 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 451 IPR005333 GO:0003700
Adu05g01767 454 MobiDBLite consensus disorder prediction 421 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01767 Adu-Chr5 43870540 43872664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01767 22 384 TCP Transcription Factor Family AT3G47620 39.808 1.63e-52 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu05g01767 TCP 2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01767 - - adu:107489244 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01767 05 43870540 43872664 Adu05g01767 05 43870540 43872664 ECH
Adu05g01767 05 43870540 43872664 Adu01g03292 01 105710656 105712655 PCT