Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01751 ATGGCTTTCTTACCAGCAAATTTCATGCTACAAACCCCTCACCACCATGATGATCACCACCACCAACAACATCATCCACCTTCCCTCAATTCAATCCTACCAACATGCTCACCCCATGATTATCATGGGGGAGCAGCAACATTTCTAGGGAAAAGATCCATGTCATTCTCGGGGATTGATCTTGGAGGAGTAGAAGAAGGTAACAACAATGGGGATGAAGAATTATCAGATGATGGATCACAGATAGGGGAGAAGAAGAGGAGGCTGAACATGGAGCAAGTGAAGGCACTTGAGAAGAGCTTTGAGTTAGGGAACAAGCTTGAACCTGAGAGAAAAATGCAGCTTGCAAGGTCCCTTGGCTTGCAACCAAGGCAAATTGCAATCTGGTTTCAGAATCGAAGAGCAAGGTGGAAGATTAAGCAGTTAGAGAGAGACTACGATCAACTCAAGCGTCAATTCGAAGCCGTCAAATCAGACAATGATGCACTTCACGCCCAGAACCAAAAACTTCAAGCTCAGATATTGGCACTGAAAAATAGAGAAGCAACAACAGAGTCAATAAACCTGAACAAAGACACAGAAGGATCATGCAGCAACAGAAGCGAGAACAGTTCAGAGATCAAGTTTGATATTTCGACAAGAACACCAACAACAACAACAACAACAACAACCACCATT 678 0.4366 MAFLPANFMLQTPHHHDDHHHQQHHPPSLNSILPTCSPHDYHGGAATFLGKRSMSFSGIDLGGVEEGNNNGDEELSDDGSQIGEKKRRLNMEQVKALEKSFELGNKLEPERKMQLARSLGLQPRQIAIWFQNRRARWKIKQLERDYDQLKRQFEAVKSDNDALHAQNQKLQAQILALKNREATTESINLNKDTEGSCSNRSENSSEIKFDISTRTPTTTTTTTTTI 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01751 226 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 222 IPR045224 GO:0003700
Adu05g01751 226 Gene3D - 77 148 - -
Adu05g01751 226 Coils Coil 132 180 - -
Adu05g01751 226 MobiDBLite consensus disorder prediction 12 31 - -
Adu05g01751 226 ProSiteProfiles 'Homeobox' domain profile. 80 140 IPR001356 GO:0003677
Adu05g01751 226 Pfam Homeodomain 85 138 IPR001356 GO:0003677
Adu05g01751 226 ProSitePatterns 'Homeobox' domain signature. 115 138 IPR017970 GO:0000981|GO:0006355
Adu05g01751 226 PRINTS Lambda-repressor HTH signature 120 136 IPR000047 GO:0003677
Adu05g01751 226 PRINTS Lambda-repressor HTH signature 111 120 IPR000047 GO:0003677
Adu05g01751 226 Pfam Homeobox associated leucine zipper 140 181 IPR003106 GO:0006355|GO:0043565
Adu05g01751 226 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 1 222 - -
Adu05g01751 226 SUPERFAMILY Homeodomain-like 75 141 IPR009057 -
Adu05g01751 226 CDD homeodomain 85 141 IPR001356 GO:0003677
Adu05g01751 226 MobiDBLite consensus disorder prediction 60 85 - -
Adu05g01751 226 SMART HOX_1 83 144 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01751 Adu-Chr5 40085282 40086714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01751 1 223 Homeobox Transcription Factor Family AT1G69780 68.142 1.35e-99 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu05g01751 Homeodomain 5.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01751 K09338 - gmx:100808033 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01751 05 40085282 40086714 Adu03g03850 03 127241420 127242758 PCT