Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01739 ATGCAAGATAATATGAAGAAGCAGAAGCAGAAGCAGGTAGTGGTGGTGGCCAATAATGAAGAATCTAATAAGAAGAAGGAGCATCGCATTGTTATGTGGACTCAAGAGGAGGATGATATTCTGAGGGAGCAGGTTGGAATCCATGGAACTGAAAATTGGGGTATTATTGCTTCTAAATTCAAGGATAAAACTACAAGACAGTGCAGAAGGAGATGGTTCACTTACTTGAATTCTGATTTCAAGAAAGGGGGTTGGTCACCGGAGGAAGATATGCTCTTGTGCGAGGCTCAGAAACTATTTGGTAACCGGTGGACAGAAATATCAAAGGTGGTTCCAGGCAGAACGGATAATGCTGTTAAGAACCGGTTCTCCACATTGCGCAAAAAGAGAGCGAAATATGAAGCATTAGCAAAAGAGAACCACACTTCTTACACCAATTCAAATAATAAGAGGGTTATTCTACAACATGGACATGTTACAGATTCAGCATCAGAATCTGGTGTGTCTACTAAGAAGATGAGGAGGCCGCATATTCCAGTGGTAGAAGAAAGGATAAACTATGGAGACAGATTACATAAACAAAATGGAACTCAGATAAGTCAGCAGCCAAGAGCGCCATTCGCCGTGCTACCTCCGAACTCTTATAATGTCAACAACTTATCAGATCAGCATGATATCTGCAGTTTGAAGTTTAATGGTTATGGCCAAAACAAGTTGCAAGGGACATTCCTCAAAAAGGATGATCCAAGGATAAACGCATTGATGCAACAAGCAGAGTTGCTAAGTTCATTAGCTCTAAAAGTTGATGCAGAGAACATGGACCAAAGTCTAGAAAATGCATGGAAGGTTCTTCAAGAGTTTCTGAAACGAACCAAAGAGTCTGATGGTCCGAGATGTAAGGTTCCGGATCTACAGCTTGTAGATCTAGGAGATTGGTTGGAGGACTTGAAGAGTAACAGTGAGGGAATTCAACCATGTTGGAGGAAATTTAAATCCATTCAAAACACAAAGTTCTATGAGGACTATAGTTTCGGATTGTATTCTAGGCAAATGGAATTATATGAAGACTCTCCTGGCAGTTCTGAGTACAGCACAGGATCAACTCTCCTCCCTCATTTGGGTGCCGACAACTCGGAACACTCGCTGCATCAGGAAATTGAAACTGAACTCAAGTCAATACACATTGGAGATCAAAAGGAATGTGAGCAAGGTGTTCTTTCTACTGCAACTTTGGATCAAGATGTTTTCACATTAAATAAGGATCGGATGAACAAAGATGGCATTGTTTCTGCCTCATCAATGACAGAGTTCAGTTCCCCTCTTCAAGTTACACCTCTGTTCAGATCCTTGGCTGCAGGAATTCCTAGCCCTCAATTTTCCGAAAGCGAGAGGAACTTTCTCATGAAAACACTTGGAATGGAATCTCCATCCTCGCAACCACCACTCTGCAAAAGAGCCCTGCTACAAAGCCTATAA 1476 0.4173 MQDNMKKQKQKQVVVVANNEESNKKKEHRIVMWTQEEDDILREQVGIHGTENWGIIASKFKDKTTRQCRRRWFTYLNSDFKKGGWSPEEDMLLCEAQKLFGNRWTEISKVVPGRTDNAVKNRFSTLRKKRAKYEALAKENHTSYTNSNNKRVILQHGHVTDSASESGVSTKKMRRPHIPVVEERINYGDRLHKQNGTQISQQPRAPFAVLPPNSYNVNNLSDQHDICSLKFNGYGQNKLQGTFLKKDDPRINALMQQAELLSSLALKVDAENMDQSLENAWKVLQEFLKRTKESDGPRCKVPDLQLVDLGDWLEDLKSNSEGIQPCWRKFKSIQNTKFYEDYSFGLYSRQMELYEDSPGSSEYSTGSTLLPHLGADNSEHSLHQEIETELKSIHIGDQKECEQGVLSTATLDQDVFTLNKDRMNKDGIVSASSMTEFSSPLQVTPLFRSLAAGIPSPQFSESERNFLMKTLGMESPSSQPPLCKRALLQSL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01739 491 CDD SANT 33 76 IPR001005 -
Adu05g01739 491 CDD SANT 85 126 IPR001005 -
Adu05g01739 491 PANTHER TRANSCRIPTION FACTOR MYB88 349 488 - -
Adu05g01739 491 PANTHER TRANSCRIPTION FACTOR MYB88 11 330 - -
Adu05g01739 491 Gene3D - 83 155 - -
Adu05g01739 491 SMART sant 81 129 IPR001005 -
Adu05g01739 491 SMART sant 29 78 IPR001005 -
Adu05g01739 491 Pfam Myb-like DNA-binding domain 33 93 - -
Adu05g01739 491 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 131 IPR017930 -
Adu05g01739 491 ProSiteProfiles Myb-like domain profile. 33 76 IPR001005 -
Adu05g01739 491 SUPERFAMILY Homeodomain-like 31 123 IPR009057 -
Adu05g01739 491 PANTHER MYB PROTEIN-RELATED 11 330 - -
Adu05g01739 491 PANTHER MYB PROTEIN-RELATED 349 488 - -
Adu05g01739 491 ProSiteProfiles Myb-like domain profile. 77 127 IPR001005 -
Adu05g01739 491 Gene3D - 19 81 - -
Adu05g01739 491 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 76 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01739 Adu-Chr5 39071385 39077071 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01739 1 328 MYB Transcription Factor Family AT2G02820 55.723 3.15e-121 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu05g01739 Myb_DNA-bind_6 2.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01739 K09422 - gmx:100807667 674.085