Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01737 ATGGGAGTGCTCGACTTCAACAGGGTCACGACTTCTGTGGGCAAAAAAAGAGAAGGAAAAGGCACCAAACACCTTGCAACTGAGAAACAAAGAAGAGAACAACTGAATGGCAAATACAAAATCCTGAGGAGTCTTATCCCAAGCCCCACAAAGATGGATAGAGCCTCTGTGGTGGGTGATGTCAATGAATACATAAGGGAGCTGCTCAAAATGAAAGCGAAAGATGATGCTACAGAGAGCTGTAACATAAAGTCTTTCAGCAATCCAGATAGATGCATAAGGACCTCATGGCTTCAAAGGAAATTGAAAGATAGCGAGGTTGATGTGCAGATTGCTGATGATGATGTTACAATCAAACTCTTCCAGAGGAAGAAGGTGGACATGTTGGCAAATAATACAGTTCCTTGTTCAATACCAAGATAA 423 0.4208 MGVLDFNRVTTSVGKKREGKGTKHLATEKQRREQLNGKYKILRSLIPSPTKMDRASVVGDVNEYIRELLKMKAKDDATESCNIKSFSNPDRCIRTSWLQRKLKDSEVDVQIADDDVTIKLFQRKKVDMLANNTVPCSIPR 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01737 140 MobiDBLite consensus disorder prediction 1 30 - -
Adu05g01737 140 Pfam Helix-loop-helix DNA-binding domain 22 68 IPR011598 GO:0046983
Adu05g01737 140 PANTHER TRANSCRIPTION FACTOR BHLH91 2 70 - -
Adu05g01737 140 MobiDBLite consensus disorder prediction 11 30 - -
Adu05g01737 140 PANTHER TRANSCRIPTION FACTOR BHLH91 2 70 IPR045895 GO:0006355|GO:0048658
Adu05g01737 140 Gene3D - 14 80 IPR036638 GO:0046983
Adu05g01737 140 PANTHER TRANSCRIPTION FACTOR BHLH91 72 129 - -
Adu05g01737 140 PANTHER TRANSCRIPTION FACTOR BHLH91 72 129 IPR045895 GO:0006355|GO:0048658
Adu05g01737 140 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 17 76 IPR036638 GO:0046983
Adu05g01737 140 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 19 68 IPR011598 GO:0046983
Adu05g01737 140 SMART finulus 25 74 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01737 Adu-Chr5 38855220 38855948 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01737 14 129 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G06170 37.415 1.19e-22 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu05g01737 HLH 4.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01737 - - gmx:100801349 189.119