Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01725 ATGGTGCGGAAGCAGAGATCGAGATCTGACTATCTCGAGGTTCAAATAAGGGAAGGAAATGGACCACCCAGGGCAACGAAATTCACAAGTACGCTTTGTCAGTGTCGATTAGGTTTTTACCGTCCGATAATTTCAGGGGAGGCATGCGCAGAAATTGATTTCAATTGGGGGGATGCTGATGATGGAATGAGCGGCGAAACCGTGCCGGAAGAGGAAGTAGAAGCGATGGATTCGTCTGTCGCAGATGCGGACATAGATGCAGAAGCAGCAGTGAGGATTGTTGATGGGATAGGGTCCTTTGGTGCAATTGAATTTTCTTCCCTGACAGCCAAAGACGTGCTGACGACGGAGTTCACAAGCCTACAGGCAGCTTATGACTACTACAACGAATTCGGTTGCATGAAAGGATTCTCGGTCAAGAGGTCCAAGGTGGGTCGCAGAACAAAGCAGGGGGCAGAGGGCAAAATAATTTGGCAGATATTTGTGTGCTCGAGGGAAGGAGAGCGCGACGGGAAACATATGCATCGGGAAGACAGGAAGAAGGATCCTCGACCGATCACGCGGTGCAGGGGTCTGTCGCGGTCATACAGAGCAGTCAAGGAAGGGGATTTGCACCAAATCAATTCCATAAGGAAATCTGGGTTGCAGGTGCCGACGATTTTCCGTGCGTTTGCCAATCAGTCAGGAGGATTCGAGACTGTTGGGTTCGAGGTAAAAGACATATATAATGCGATAGAGAAGCAAAGGCGGGCTGGCACGACAGATGCGGAGTCCGTGCTAAAGTTCTTGGGAACTTTAAGGACCATTGATTCCGGGATGTTCTGGAGgaacgcCACTGCTAGAGTTGGACGGCTGGGTTTTCCTAGGAAATTCTGTCTATGCCTCATGGGAGATCTAGAGGTTAACGAATTTGAGACAATATGGACAGATAGCGTGGTGGACCACGGGTTAGAGGATCATCCGTGGATAGTAGATATGTATTCTAAGAAGCATTCCTGGTCTAATGCCCATATCCGGGAGAAATTCTTCGCAGGACTGAAGACGACATCCAGGAGGAGAGAACTAGTGGCAAACTACAAGTCTACATATGGCGAGCCTGTTGTGAAGACGAAACTCGAGGCCATTGAGCAGTTCGCTGCAACGGTTTATACAAGAGAGGTTTTTGAACTATTTCAGGAGGTGCTGATGCTAGCCAGCAATATTAGAGTTGTGTCCACCAAGAGGACGAGCGTTGGTGTTTTGTTCGAAGTTGCAATGTACTGCAAGCAGATATCATGGGCGGTGTCGTGGGCCGAGGAAGACGACGAATTCAGCTGTTTTTGTCAGCGAATGGAGTCCTTTGGGCTTTCTTGTGTCCACATGGTTGGGGTTCTGGTTTATCTGAACATGACAGCTATCCCCAAAGGCCTAATACTTGACCGGTGA 1425 0.4877 MVRKQRSRSDYLEVQIREGNGPPRATKFTSTLCQCRLGFYRPIISGEACAEIDFNWGDADDGMSGETVPEEEVEAMDSSVADADIDAEAAVRIVDGIGSFGAIEFSSLTAKDVLTTEFTSLQAAYDYYNEFGCMKGFSVKRSKVGRRTKQGAEGKIIWQIFVCSREGERDGKHMHREDRKKDPRPITRCRGLSRSYRAVKEGDLHQINSIRKSGLQVPTIFRAFANQSGGFETVGFEVKDIYNAIEKQRRAGTTDAESVLKFLGTLRTIDSGMFWRNATARVGRLGFPRKFCLCLMGDLEVNEFETIWTDSVVDHGLEDHPWIVDMYSKKHSWSNAHIREKFFAGLKTTSRRRELVANYKSTYGEPVVKTKLEAIEQFAATVYTREVFELFQEVLMLASNIRVVSTKRTSVGVLFEVAMYCKQISWAVSWAEEDDEFSCFCQRMESFGLSCVHMVGVLVYLNMTAIPKGLILDR 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01725 474 ProSiteProfiles Zinc finger SWIM-type profile. 426 462 IPR007527 GO:0008270
Adu05g01725 474 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 286 351 IPR031052 GO:0006355
Adu05g01725 474 PANTHER OS04G0354200 PROTEIN 358 474 - -
Adu05g01725 474 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 358 474 IPR031052 GO:0006355
Adu05g01725 474 PANTHER OS04G0354200 PROTEIN 286 351 - -
Adu05g01725 474 Pfam FAR1 DNA-binding domain 126 189 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01725 Adu-Chr5 37908515 37910952 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu05g01725 FAR1 6.8e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01725 - - adu:107460993 371.318