Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01705 ATGGAGTCATCATCATCAACATCATCATCATCGACAAGAAGAACAACATCAACCGAAATAACATCAACATCGTTGATGGCGATACAGAATTCCTTCGACTCCGTTTATTCCCGCTACGCACGCGAGGCGCTCGACGAATTGCCTGGTAACTTCACCATCACCGACCCATCAATCCCAGGCCACCCAATCATCTTTGCCAGCCAAGGCTTCCTCAAGATGACCGGTTACGACCGAGACGAGGTTGTCGGAAGAGGTGGGGCCATGTTCCAAGGTGATAGAACTTCTAGAAGGTCGTTGATGGAGGTCAGGGAGGCCGTTAGGAATGATCGGAGCTGCCAGGTCAGCTTGCTTAACTACCGCAAGGATGGGACACCCTTTTGGATGCTCTTTCATGTGAGTCCTGTTTTTGGAAGGGATGGTGGCCGGGTTGTTCACTTTGTGGCGGTTCAGGTTCCTTTGGAAGGGAGAAGGCTGAGGAGGCGACGGTCTATTGGGTGCCGGAGAGGTAGCGGCGATGACGGTGGTAGTGGCGATTATGTTCTCGGGTGTTGTAGGAAGGAGGTGTGCAATGATAACAGCTTGGAGGTTGAGTTAGTTTCTTCCATGGATCACGGGTTGGACCATGATACTAAAGAATTGGACAGTGACAAGCCGTGTGAGGCAACTGACGACGAGAAGAGAAGTGTGATGGTTGCAATGGACAACATTTTTTCTGTGCTAACTCACTACAGCGAGTCAACAGGCAGATTGGTATGTAGAAAGAGATGCAGCATACCTGACATGGGTCTTCTTAGCACTTCCTTGATTATTTCTCTTGGTAGAATCAAACAAAGCTTTGTATTAACTAATCCGCATTTACCTGACATGCCTATTGTATATGCCAGTGATGCCTTCTTGAATTTGACAGGTTATGCAAGGGATGAAGTTTTGGGCCGCAATTGTAGATTTTTAGGTGGACCGGATACTGATGACTCAACTTTATATCTGATAAGGGAAAGCATTAAAAATGAACAACCATGCACAGAAGGATAG 1032 0.4738 MESSSSTSSSSTRRTTSTEITSTSLMAIQNSFDSVYSRYAREALDELPGNFTITDPSIPGHPIIFASQGFLKMTGYDRDEVVGRGGAMFQGDRTSRRSLMEVREAVRNDRSCQVSLLNYRKDGTPFWMLFHVSPVFGRDGGRVVHFVAVQVPLEGRRLRRRRSIGCRRGSGDDGGSGDYVLGCCRKEVCNDNSLEVELVSSMDHGLDHDTKELDSDKPCEATDDEKRSVMVAMDNIFSVLTHYSESTGRLVCRKRCSIPDMGLLSTSLIISLGRIKQSFVLTNPHLPDMPIVYASDAFLNLTGYARDEVLGRNCRFLGGPDTDDSTLYLIRESIKNEQPCTEG 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01705 343 ProSiteProfiles PAS repeat profile. 291 337 IPR000014 -
Adu05g01705 343 CDD PAS 287 317 IPR000014 -
Adu05g01705 343 ProSiteProfiles PAS repeat profile. 36 84 IPR000014 -
Adu05g01705 343 PANTHER PROTEIN TWIN LOV 1-LIKE 27 341 - -
Adu05g01705 343 CDD PAS 63 150 IPR000014 -
Adu05g01705 343 SUPERFAMILY PYP-like sensor domain (PAS domain) 53 149 IPR035965 -
Adu05g01705 343 SMART pas_2 38 107 IPR000014 -
Adu05g01705 343 SMART pas_2 266 339 IPR000014 -
Adu05g01705 343 PANTHER PROTEIN TWIN LOV 1 27 341 - -
Adu05g01705 343 ProSiteProfiles PAC domain profile. 110 165 IPR000700 -
Adu05g01705 343 SUPERFAMILY PYP-like sensor domain (PAS domain) 281 340 IPR035965 -
Adu05g01705 343 Gene3D PAS domain 278 343 - -
Adu05g01705 343 Gene3D PAS domain 50 168 - -
Adu05g01705 343 SMART pac_2 113 156 IPR001610 -
Adu05g01705 343 Pfam PAS domain 60 150 IPR000014 -
Adu05g01705 343 Pfam PAS domain 278 332 IPR000014 -
Adu05g01705 343 MobiDBLite consensus disorder prediction 1 22 - -
Adu05g01705 343 TIGRFAM sensory_box: PAS domain S-box protein 63 146 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01705 Adu-Chr5 36211459 36215918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01705 268 341 AGC Kinase Gene Family AT5G58140 52.703 1.96e-21 94.0