Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01689 ATGCAGATTAAGAGAGATGTGTCATATGGCTTCACAAAAAAGGGTCTTATTGATGTCTATATTGAATATGGGGTTTCATCACCTGAGCTACTACAAGGAAAGGAGGTTTCTGAGGCTAACAAGACACCAACAAGACCTGTAAAGCTGACACctagaagaagACTCATGCAACTATGTTATGGTACTTGGGTATTGGGAAACAATTCAGACAATGCTGGAAGTGGTAGTACCATATCAGTAATCCGCTTGCTGACTTATGCCGAAAATGACCCTGAAGGACTTGTATGCAACCTAGAGCTCAATCTGAGAGGAAAGTATGCCGCATTAGCTAGCGGTTATAACATCCTAAGTGACAGTGGCAGTGCCAAATCAGCGATCTACTTGCTGACTCACGCCGAAAATAGTCTGAAGGACTTTCCTAACTACCCGCGTTTGGCGCTGCATTCTTCTTTCAATAATGAGTCGCAAGAGAGAGAAACTCTCTTACATTCTTCCCGCCACGCCCCCTACCCGAAGCGCCGCCGCCCACCGCCGGAGACCGTGCTTCAAGAGCCGGAGGACCGACCATCCTCGAGGCCTGCGCCCCCGTCCGCGGTGGTCATTGTGGGCCTTCCCAACAACTGCTCCGTCCTTGACCTCAAGTCCCGCTTCGAGATCTACGACCCCATTGCTCGCATTCGCATCGATGGCGACACAGTCGGATATGTCACCTACCGGACCAAGGACTCCGCCGATGCCGCTATCACCGCTGGCGCCGACGAGCTTCCGCAAGTCTACTGCTACAATATTTTAAAAAGGGACATTGTGAAATTCGGATATGTCACCTACCGGACCAAGGACTCCGCCGATGCCGCTATCACCGCTGGCGCCGACCCGTCCTTTGGAATTACTCTTCACTCCAAAAAGGTCCCCTTTTTTTCGCCTTTTGTTTTCTATCTTCGAAATTTAGGGTTTAGTGTTTTCGGATCTTACAATTTTGAAGTTTCCATGTTGTGGAGGAGTTGTTTCCAGCTTAATTAA 1020 0.4873 MQIKRDVSYGFTKKGLIDVYIEYGVSSPELLQGKEVSEANKTPTRPVKLTPRRRLMQLCYGTWVLGNNSDNAGSGSTISVIRLLTYAENDPEGLVCNLELNLRGKYAALASGYNILSDSGSAKSAIYLLTHAENSLKDFPNYPRLALHSSFNNESQERETLLHSSRHAPYPKRRRPPPETVLQEPEDRPSSRPAPPSAVVIVGLPNNCSVLDLKSRFEIYDPIARIRIDGDTVGYVTYRTKDSADAAITAGADELPQVYCYNILKRDIVKFGYVTYRTKDSADAAITAGADPSFGITLHSKKVPFFSPFVFYLRNLGFSVFGSYNFEVSMLWRSCFQLN 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01689 339 MobiDBLite consensus disorder prediction 156 197 - -
Adu05g01689 339 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 199 249 IPR000504 GO:0003723
Adu05g01689 339 SUPERFAMILY RNA-binding domain, RBD 166 250 IPR035979 GO:0003676
Adu05g01689 339 MobiDBLite consensus disorder prediction 159 186 - -
Adu05g01689 339 Gene3D - 181 256 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01689 Adu-Chr5 34008176 34013049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01689 163 254 Homeobox Transcription Factor Family AT1G27050 54.167 1.37e-20 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01689 - - gmx:100793672 112.849