Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01684 ATGTCAGATTATATTGTTGAAGCCGCTTATGCGGTTGACTCCGTGCAAGACATTACATCTTTGAAATTTAGTGAGAATTTTGCGGAGAAAATTGGCAAATACCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATATGAAGCAAGGATTCAGGATGGAGAAATATTACACGATGGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTGGATGTGAAGCCCGAATGGATGTTAAATTTGTACCAGAAAGTGGAAGGTGGCATATCTTTTATTTCTCTGACCAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTGCCCACAGAAAAATGTCAGAGGCAGATATTATGCAAATGATGAACATACTAAAGTCAGGGATTAGCACTTTACAGATATTTGGTCTTCTAGCTAGTCAAGCAGGCGGCACGAGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAGGCATGTCACGATTCAAGAGAGCTGGATCAATGCGGGTTCTGAACATAGATAATACCGATGATTGCATAAAGTACATTGTGTGTAAGCATGGGAGGCCCGATTTTATGTGGACCGTTGATTTTTGTCAAGAAGAAATGATCTTCATTTGTACCTGTTTAAGAATGGAGTCATTTGAAATTCCCTGCAAACATATTGTGAAAGTTCTGGTTGACAGAGACATCCGTGAGATTCCCCGGTCATTGGTATTGGATAGATGGACAAAAAAGGTTAAATCAGCACTCAATGATCCGTGTGGATTCACCAGGGATGCTGTTGTTATTAGTCGTCAAAGTGCTTTGGTGGAATTTTCTAAACAACTGGCTGCTGTTGCTGCTAAAGTACCAGAGAGATATGAAGAGACACGTGATTTAATTATGGGATTGTACTCATCTTACAAGGCTGCAGACGAAGGAGATAATCAACCTCACTCAGGTGTAGCTAGAAGTAGCAATCCGTATGTGCATCCAACCACTGGAGGCTCAGGACAGCCATCTAAGAAGAAGAAGCGGCAACGTTGTAGTGTTTGTCAAATGGAAGGACATAAGAAGACAACATGTCCTTGGCAAAAGGACATTGACAACAACGTTATAGAAAATGAAGCAATCGGTTTGGACGATGGCGACATGTGTACCGAAGCGACAGCTGAGTTAGATAGTGATAGTTAG 1206 0.408 MSDYIVEAAYAVDSVQDITSLKFSENFAEKIGKYHFSTLQLAFDFYMKQGFRMEKYYTMEKRKKEPRLETRTGCEARMDVKFVPESGRWHIFYFSDQHNHDLLDTQFSAMLPAHRKMSEADIMQMMNILKSGISTLQIFGLLASQAGGTSVEEVGGYAVEGSTIIFQGMSRFKRAGSMRVLNIDNTDDCIKYIVCKHGRPDFMWTVDFCQEEMIFICTCLRMESFEIPCKHIVKVLVDRDIREIPRSLVLDRWTKKVKSALNDPCGFTRDAVVISRQSALVEFSKQLAAVAAKVPERYEETRDLIMGLYSSYKAADEGDNQPHSGVARSSNPYVHPTTGGSGQPSKKKKRQRCSVCQMEGHKKTTCPWQKDIDNNVIENEAIGLDDGDMCTEATAELDSDS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01684 401 ProSiteProfiles Zinc finger SWIM-type profile. 202 240 IPR007527 GO:0008270
Adu05g01684 401 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 190 304 IPR031052 GO:0006355
Adu05g01684 401 MobiDBLite consensus disorder prediction 323 344 - -
Adu05g01684 401 PANTHER OS03G0181600 PROTEIN 190 304 - -
Adu05g01684 401 MobiDBLite consensus disorder prediction 317 351 - -
Adu05g01684 401 PANTHER OS03G0181600 PROTEIN 48 150 - -
Adu05g01684 401 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 48 150 IPR031052 GO:0006355
Adu05g01684 401 Pfam FAR1 DNA-binding domain 47 103 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01684 Adu-Chr5 33685809 33687994 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu05g01684 FAR1 3.1e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01684 - - adu:107489124 473.396