Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01672 atgggtgtttcagtccatgTCCTTACCCCAGCTTCAATCTTCACTCCTCACTCACTACTGACTCCGCCGCATACTTCGTTGTTGGGTTGCTGTTATCCGTCGTATTCACCGGCGGAGCAACTACTGAATCCATTCTGCGCTTTAGCTCCTTCCAGATATTTCAGCATCAAATATTGTCAAGTTATTCACTTAACTGAAGTTTCCATCGAAAAAGCCAAGATGTCGAGGAAGGGTTTGATGGAACAGGACCTGAGTAAGTTGGACGTGACAAAATTGCATCCACTTTCTCCGGAAGTCATATCTCGGCAGGCTACAATTAATATTGGCACCATAGGGCATGTGGCACATGGCAAATCAACTGTTGTGAAAGCAATATCAGGTGTTCAGACCGTGCGTTTTAAAAATGAGTTGGAGAGAAACATCACAATCAAGCTTGGCTATGCAAATGCAAAGATATATAAGTGTGAAGATGATAGGTGTCCAAGGCCTATGTGCTACAAGGCTTATGGAAGTGGAAAGGAAGATAGTCCAATGTGTGATGTACCAGGGTTTGAAAACTCCAAGATGAAGTTGCTGAGACATGTTTCTTTTGTGGATTGCCCAGGACATGATATTCTTATGGCCACAATGCTTAATGGAGCTGCAATCATGGATGGAGCTTTACTACTCATAGCTGCTAATGAGAGTTGCCCGCAACCACAAACCTCTGAACATTTAGCTGCTGTGGAAATTATGCGTCTACAGCACATAATAATTCTTCAGAACAAGGTTGATCTGATTCAAGAGAATGTGGCAATGAATCAGCATGATACAATTAAAAAGTTCATTGAAGGAACTGTAGCTGATAGTGCACCAGTGGTACCTATTTCAGCACAACTGAAGTATAATATTGATGTTGTGTGTGAGTATATTGTGAAAAAGATCCCAATCCCAGAAAGGAATTTTACTTCGCCACCCAATATGATTGTTATTCGGTCATTTGACGTTAATAAACCTGGGTTTGAGGTTGACGAAATAAAAGGAGGTGTAGCTGGTGGAAGTATCCTGAGGGGTGTTTTGAGGGTCAACCAATTCATTGAAGTTCGACCTGGGATAGTTGTGAAAGATGAGAGTGGAAATATCAGATGCACACCCATATACTCTAGAATAGTTTCATTATTTGCCGAGCAAAATGAGCTTCAATTTGCTGTGCCAGGAGGTTTAATTGGTGTTGGAACAACAATGGATCCCACTTTGACCCGTGCTGACAGGTTGGTCGGGCAAGTTCTAGGAGAGGTTGGATCACTGCCGGAGGTCTTTGTTGAACTTGAGGTAAATTTCTTCTTGCTTCGACGGCTTCTCGGTGTTCGGACCAAGGGCTCAGAGAGACAGGGAAAGGTATCTAAGCTGGCTAAAGCAGAGATGCTAATGTTGAACATAGGATCAATGTCGACGGGTGCGAGAGTTGTTGCCGTGAAGAACGATCTGGCGAAGTTGCAACTTACCTCCCCTGTGTGCACTAACAAGGGTGAGAAGATCGCACTTAGCCGACGTGTTGAGAAGCATTGGCGTCTAATCGGGTGGGGTCAAATCCAAGCCGGAATCACTCTTGACGTCCCTGCCGCCCCAACTGAGTTGAAGTGA 1623 0.4362 MGVSVHVLTPASIFTPHSLLTPPHTSLLGCCYPSYSPAEQLLNPFCALAPSRYFSIKYCQVIHLTEVSIEKAKMSRKGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCYKAYGSGKEDSPMCDVPGFENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAMNQHDTIKKFIEGTVADSAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFTSPPNMIVIRSFDVNKPGFEVDEIKGGVAGGSILRGVLRVNQFIEVRPGIVVKDESGNIRCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKAEMLMLNIGSMSTGARVVAVKNDLAKLQLTSPVCTNKGEKIALSRRVEKHWRLIGWGQIQAGITLDVPAAPTELK 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01672 540 Pfam Elongation factor Tu GTP binding domain 105 309 IPR000795 GO:0003924|GO:0005525
Adu05g01672 540 Gene3D - 103 313 IPR027417 -
Adu05g01672 540 PRINTS GTP-binding elongation factor signature 250 259 IPR000795 GO:0003924|GO:0005525
Adu05g01672 540 PRINTS GTP-binding elongation factor signature 107 120 IPR000795 GO:0003924|GO:0005525
Adu05g01672 540 PRINTS GTP-binding elongation factor signature 212 223 IPR000795 GO:0003924|GO:0005525
Adu05g01672 540 PRINTS GTP-binding elongation factor signature 196 206 IPR000795 GO:0003924|GO:0005525
Adu05g01672 540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 319 IPR027417 -
Adu05g01672 540 SUPERFAMILY Translation proteins 313 427 IPR009000 -
Adu05g01672 540 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 74 536 - -
Adu05g01672 540 Pfam Initiation factor eIF2 gamma, C terminal 435 524 IPR015256 -
Adu05g01672 540 Gene3D Translation factors 314 429 - -
Adu05g01672 540 Pfam Elongation factor Tu domain 2 341 423 IPR004161 GO:0005525
Adu05g01672 540 Gene3D Translation factors 430 528 - -
Adu05g01672 540 CDD eIF2_gamma_III 430 524 IPR015256 -
Adu05g01672 540 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 74 536 - -
Adu05g01672 540 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 428 525 IPR009001 -
Adu05g01672 540 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 103 312 IPR000795 GO:0003924|GO:0005525
Adu05g01672 540 CDD eIF2_gamma 106 313 IPR044128 GO:0005525
Adu05g01672 540 CDD eIF2_gamma_II 314 427 IPR044127 GO:0000049
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01672 Adu-Chr5 32602165 32610229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01672 74 536 Eukaryotic Initiation Factors Gene Family AT1G04170 89.655 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01672 K03242 - gmx:100784099 891.723