Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01611 ATGGCTCTGAAGAATGCTGTGCTTCTTCTGAGCCTTCTCTTTGTTTCACATATTTTTTTGATACAAACATGTTATTCCCAAACCAATTTTGATCCTCAGAACATTGAAACTTTCTATCCAATTGAAACAGCAGAAGAACCATCATTACCAACAATAAATCCGGAAGAATCACCGCCATCTCCATCACCATCATCAAACAGTAAAGTAGCGAAGGCTGTAGCTGCAACTGCAGCATGCACACTAGCTGTTTGTGGAATTGTGTTCTTCTTAGGTCTAAGGTGCTTCAGAGCAAAGAAGAGAATTGACATAACCAACACTACTACAACAACCATGGCTTCTTCTGCAACACATAGAGATCATAGGAATGTTGTGGTGCCTCTGCCTCAGCCTCAACCTCAACCTCAGGTGAGTGTGTATGAGAGAATGGAAGGTAACATAAAAGGGCTGATTGTTGATGAGAATGGTTTGGATGTTGTATATTGGAAAAGGCTTCAAGATGGTAAGAACTCAAAAGAGGTATTGGGTAAAAGTCACAAAAACAAAGAAAACGATCACGAAGGATATTATGATCAAAGGACACAACCTGAATCTAATGTTCAAGAAACTCCTTTGCTAAGAGGGTTATCTTCAAATTCTTCACATTTGAATATATTTCCTGTAGAACCATACACTATTATGAAGATTCCACCACCTCATCCTCCTCCTCCAATTAATGGTTTTGATAAACTTGATTTTGTTAGCCATTCACAACCAAAACCACCCTCCATTTCTTCATCATCAACTCCTACACCACTTTCACCTTCCACTCCAAGAATCCAAGATAGAAAAAGTTCAGCACCTAAACTGCCGCCACCTCCACCACCTCCGCCACCAATTCCAAAGAGCCAAGCAGTGCCACCACCATGTCCTCCACCAGTACCAGAAAGAAAGAGCCAAGCACCTCCACCACAACCTCCTCCTCTTCCACCAATTACTGGTAGAAAGAGCCAAGCCCCGCCACCGCCGCCTCCACCGATTCCTTCTAGAAAGGGGCCACCAAAGGGAGGAAATCCAAAGTCATCATCAAAACCACCTCCTACCCCTATTGAAGCACCATCATACTCGAGAAAAGGCAAATCTAAAGATGAAGATATGCAAGAAACCAGCAATCGTCAAGTGAAACTGAAGCCTCTGCATTGGGATAAAGTCAATGCTAATCTTGATCACTCCATGGTTTGGGACAAAATTGACCGTGGCTCCTTCAGGGTCGATGATGATCTTATGGAAGCTCTCTTTGGCTATGTTGTTAACCACAACACCCCAAAAGCGAATGATTCAGGGAGTCCAAGCAAGGGTTCCTCTGCCTCAGCTCCATCAACAAAGGCATCCACCCTTCTTGACCCAAGAAAATCACAGAACACTGCCATTGTGTTGAAATCTCTTGCAATATCAAGAAAAGAAGTCTTTGATGCACTCCTTGATGGTCATGGCCTCAACACAGATACCATTGAAAAGCTTTCTAGAGTTGCTCCAACAGAAGAAGAGCAATCTCTAATACTCCAATACAGAGGAGATCCTGAAAACCTTCCTGCAGCGGAGTCCTTCCTGTATCATACTCTCAAAGCCGTTCCTTCGGCGTTTAAGCGCTTGAATGCCATGCTGTTCAGGCTGAACTATGATGCCGAGATTGTCGAAATCAAGGAGTTTCTGCAGACACTTGAGTTGGGATGTAAGGAGCTTAGGAACCAAGGAGTGTTCCTGAAGCTTCTTGAAGCAGTGCTTAAGGCCGGAAATCGCATGAATGCAGGTACTCATAGAGGTAATGCTCAAGCTTTCAACTTGGCTTCTCTTAGGAAACTTTCTGATGTGAAGAGCACCGATGGAAAAACCACATTGCTTCACTTTGTGGTTGAGGAAGTGGTCCGATCTGAAGGCAAACGTGCTGTTCTCAATCGAGACTACAGCGTGAGCCGAAGTAGCAGCAGAAGTAGAAGTAGCAGCAGTATTAGCAGTGGAAACACTGAGAATTCTGTTTCAGATGAACAAAGAAAAAGGGAATACATAATACTAGGATTGCCAATTGTTGGAGGGGTCAGTTCTGAGTTCTCCAATGTAAAGAAAGCAACACTAACAGATTACAAAAGTTTTGTTGGTTCAATCTCAGCACTTTCAGCAAGGATAGCTGAGATTCGAGAACTCGTTTTGAAGTGTGGAGGAAATGATAAAGGAGGGAATTTTGCAAGAGAAATGAACCGTTTTCTATCAGAAGCTGAGGAAGAAGTGAAATTGGTGAGTGAAGAACATGGAAGGGTGATGCAGCTTGTGAAGAAAACAACAGCTTATTATCAAGGAGGAGGGGCATGGAAAGAGAGTGAACAACCGCTTCAACTGTTTGAGATAGTGAAGGATTTTCTGGGAATGGTTGATCAAGCATGCATTGAGATTGCTCGTAACATGCAGAAGAGGAAGTGCACAAAGTAG 2460 0.4321 MALKNAVLLLSLLFVSHIFLIQTCYSQTNFDPQNIETFYPIETAEEPSLPTINPEESPPSPSPSSNSKVAKAVAATAACTLAVCGIVFFLGLRCFRAKKRIDITNTTTTTMASSATHRDHRNVVVPLPQPQPQPQVSVYERMEGNIKGLIVDENGLDVVYWKRLQDGKNSKEVLGKSHKNKENDHEGYYDQRTQPESNVQETPLLRGLSSNSSHLNIFPVEPYTIMKIPPPHPPPPINGFDKLDFVSHSQPKPPSISSSSTPTPLSPSTPRIQDRKSSAPKLPPPPPPPPPIPKSQAVPPPCPPPVPERKSQAPPPQPPPLPPITGRKSQAPPPPPPPIPSRKGPPKGGNPKSSSKPPPTPIEAPSYSRKGKSKDEDMQETSNRQVKLKPLHWDKVNANLDHSMVWDKIDRGSFRVDDDLMEALFGYVVNHNTPKANDSGSPSKGSSASAPSTKASTLLDPRKSQNTAIVLKSLAISRKEVFDALLDGHGLNTDTIEKLSRVAPTEEEQSLILQYRGDPENLPAAESFLYHTLKAVPSAFKRLNAMLFRLNYDAEIVEIKEFLQTLELGCKELRNQGVFLKLLEAVLKAGNRMNAGTHRGNAQAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRAVLNRDYSVSRSSSRSRSSSSISSGNTENSVSDEQRKREYIILGLPIVGGVSSEFSNVKKATLTDYKSFVGSISALSARIAEIRELVLKCGGNDKGGNFAREMNRFLSEAEEEVKLVSEEHGRVMQLVKKTTAYYQGGGAWKESEQPLQLFEIVKDFLGMVDQACIEIARNMQKRKCTK 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01611 819 MobiDBLite consensus disorder prediction 171 191 - -
Adu05g01611 819 SMART it6_source 378 816 IPR015425 -
Adu05g01611 819 MobiDBLite consensus disorder prediction 47 67 - -
Adu05g01611 819 PANTHER FORMIN-LIKE PROTEIN 4 8 817 - -
Adu05g01611 819 Coils Coil 740 760 - -
Adu05g01611 819 MobiDBLite consensus disorder prediction 651 671 - -
Adu05g01611 819 MobiDBLite consensus disorder prediction 229 389 - -
Adu05g01611 819 MobiDBLite consensus disorder prediction 368 389 - -
Adu05g01611 819 MobiDBLite consensus disorder prediction 250 275 - -
Adu05g01611 819 MobiDBLite consensus disorder prediction 279 364 - -
Adu05g01611 819 MobiDBLite consensus disorder prediction 651 670 - -
Adu05g01611 819 MobiDBLite consensus disorder prediction 432 461 - -
Adu05g01611 819 MobiDBLite consensus disorder prediction 171 198 - -
Adu05g01611 819 Pfam Formin Homology 2 Domain 380 801 IPR015425 -
Adu05g01611 819 PANTHER FORMIN-RELATED 8 817 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Adu05g01611 819 Gene3D Formin, FH2 domain 400 819 IPR042201 -
Adu05g01611 819 ProSiteProfiles Formin homology-2 (FH2) domain profile. 378 819 IPR015425 -
Adu05g01611 819 SUPERFAMILY Formin homology 2 domain (FH2 domain) 455 816 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01611 Adu-Chr5 29700922 29703535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01611 11 816 FH2 protein (formin) Gene Family AT1G70140 43.250 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01611 - - gmx:100780368 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01611 05 29700922 29703535 Adu05g01611 05 29700922 29703535 ECH
Adu05g01611 05 29700922 29703535 Adu03g03820 03 126879487 126882040 PCT