Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01586 atggatagccgtgctgtgacaggATGCCATTCCATCTGGCAGTATGGTTCTAGATATTTGTTCGTTAGATGTGACAATGAACCAGCTCCATGGATTGCTGATAATCTGAAAGCACTACACGACTTGCTTCCAAATCAAGCAGAGGGTAGTCAAGCTTATATACTGGACGACATTATCGACCATGTTAAATATTTGCAGCTTCAATTAAAGGAACTAAATGGAAGTAGACTACAAGCTGAATCAACTGCTATACCACTGGTTTTCCATGAGGGTTATGGGCATTATATTGACCAGCAGAAGCTGAATGAACCACTTGAAGAGATGATGGGGAAACTTCTTGAAGAGAATCCTGCATCTGCCAGTCAGCTGCTGGAGAACAATGGTCTTGTCCTGCTGCCTATGGAGTTGGTTCAAGACTTGTACCAATCCATGCAAATCTTTGGCAACAGCAATGCACTTGTCTGA 465 0.4022 MDSRAVTGCHSIWQYGSRYLFVRCDNEPAPWIADNLKALHDLLPNQAEGSQAYILDDIIDHVKYLQLQLKELNGSRLQAESTAIPLVFHEGYGHYIDQQKLNEPLEEMMGKLLEENPASASQLLENNGLVLLPMELVQDLYQSMQIFGNSNALV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01586 154 CDD bHLH_AtbHLH_like 32 72 IPR045239 -
Adu05g01586 154 PANTHER TRANSCRIPTION FACTOR BHLH66-LIKE ISOFORM X1 32 137 - -
Adu05g01586 154 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 32 77 IPR036638 GO:0046983
Adu05g01586 154 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 32 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01586 Adu-Chr5 28505272 28507019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01586 32 140 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 36.937 2.72e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01586 - - ahf:112769661 291.582