Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01577 ATGATGAATTACTCATCGTCTTCTTCAGAAAAGCCAGCATCAGAGCTGAAGCTATTAGGTTTTCCTTTGGAAAATACCACTAGCAGAACTAATAATAACTGTATAGTGTGTTCATACTGTGATCGAAGATTCCAGAACTTTCAAGCACTTGGAGGGCACCAGAATGCGCATAGAAGAGAGAGGCAAATTATCGCTATGCATAATCTACTACCGTACCAATACAAACCAATAATAATCGCTGCTTTTGGTGACGCTGTATTGCCACCGCCGGAAAAGCTATTGTTACCTGCGGTGGAGGCATCACCGGCGGGAATGCGCCGCCGCAATAACTCTCCCTCTGTAGGAAGAGTTAGCGATGATGATGACATTGATCTTGAATTGAGATTAGCTACCTCCCCTGATAAGGAGTCTATAAGGTGTTTGAGAAAACACCGTAGTTAA 441 0.4331 MMNYSSSSSEKPASELKLLGFPLENTTSRTNNNCIVCSYCDRRFQNFQALGGHQNAHRRERQIIAMHNLLPYQYKPIIIAAFGDAVLPPPEKLLLPAVEASPAGMRRRNNSPSVGRVSDDDDIDLELRLATSPDKESIRCLRKHRS 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01577 146 Gene3D Classic Zinc Finger 6 71 - -
Adu05g01577 146 SUPERFAMILY beta-beta-alpha zinc fingers 31 63 IPR036236 -
Adu05g01577 146 MobiDBLite consensus disorder prediction 99 119 - -
Adu05g01577 146 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 62 IPR013087 -
Adu05g01577 146 PANTHER ZINC FINGER PROTEIN 5 3 62 IPR044299 GO:0010090
Adu05g01577 146 Pfam C2H2-type zinc finger 36 60 - -
Adu05g01577 146 ProSitePatterns Zinc finger C2H2 type domain signature. 37 57 IPR013087 -
Adu05g01577 146 PANTHER ZINC FINGER PROTEIN 6-LIKE 3 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01577 Adu-Chr5 28000678 28001148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01577 13 70 C2H2 Transcription Factor Family AT1G67030 41.667 5.90e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01577 - - aip:107640487 278.1