Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01548 ATGTCGATCTCCTGCTCCGACTTCTTCTCTGACTCCGATCTTTTCTGCGCTGAGGACACCTCCGGAATCCTCTCCGAAGAGTCTCCGGAATCCTCTTCCTCCTTCTCCGACTTCGACTCATTATCTCCGCCGCTGCCGCCGATGGAGGAGGAGGAGTCCATAGCCGGATTCCTCGAAGACGAACAAAACTTCGTCCCTGGATTCGAGTATCTCACGAGGTTCCAATCTCACTCGCTGGATGCCTCCGCAAGAGAAGAATCCGTTGCCTGGATTCTCAAGGTGCAGGCTTACTACGGTTTTCAGCCGTTGACCGCGTATCTTTCCGTCAACTACATGGATCGATTCTTGAACTCTCGGCAGTTGCCGCAAACAAATGGGTGGCCGCTGCAACTTCTATCTATTGCATGCTTGTCTCTAGCGGCAAAGATGGAAGAGCCTCTTGTCCCTTCTCTCTTGGACCTTCAGGTAGAAGGTGCCAAATACATTTTTGAGCCCAGAACAATTCAAAGGATGGAGCTGCTTGTTCTGGGTGTCCTGGATTGGAGGCTAAGATCAGTCACCCCATTTAGCTTTCTCGGTTTCTTTGCTTGCAAGTTGGATTCAACTGGAACTTTTACTAGATTCCTCATTTCACGGGCTACACAAATCATATTATCCAATATCCAAGAGGCTAGCTTTCTTGCATACTGGCCATCATGCATTGCTGCTACGGCCATACTATGTGCAGCTAACGAAATTCCAAATTGGTCCCTCGTCAAGCCTGAGCATGCCGAATCCTGGTGCCAGGGGCTTAGAAAAGAGAAAATTAGAGGTTGCTACCAATTAATGCAAGAGCTACTTGTGATTGATAATAATCAGAGGAAGACTCCTAAGGTGTTACCACAGCTGCGAGTGATGACGACTCGGCCCCTAACGAGGTCAAGTGTCTCCTCATTCTTATCATCGTCGTCGTTGTCATCGTCTACTTCATCCTCTGCATTCTCATTGTCTTATAAAAGGAGGAAATTAAATAACTGTTTCTGGGTAGATGATCACAAAGGAAACGCCCCTTGA 1053 0.4796 MSISCSDFFSDSDLFCAEDTSGILSEESPESSSSFSDFDSLSPPLPPMEEEESIAGFLEDEQNFVPGFEYLTRFQSHSLDASAREESVAWILKVQAYYGFQPLTAYLSVNYMDRFLNSRQLPQTNGWPLQLLSIACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIQRMELLVLGVLDWRLRSVTPFSFLGFFACKLDSTGTFTRFLISRATQIILSNIQEASFLAYWPSCIAATAILCAANEIPNWSLVKPEHAESWCQGLRKEKIRGCYQLMQELLVIDNNQRKTPKVLPQLRVMTTRPLTRSSVSSFLSSSSLSSSTSSSAFSLSYKRRKLNNCFWVDDHKGNAP 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01548 350 CDD CYCLIN 90 176 IPR013763 -
Adu05g01548 350 MobiDBLite consensus disorder prediction 24 40 - -
Adu05g01548 350 MobiDBLite consensus disorder prediction 22 49 - -
Adu05g01548 350 PANTHER CYCLINS 1 324 IPR039361 -
Adu05g01548 350 SMART Cyclin_C_2 186 321 IPR004367 -
Adu05g01548 350 Pfam Cyclin, C-terminal domain 186 292 IPR004367 -
Adu05g01548 350 ProSitePatterns Cyclins signature. 84 115 IPR006671 -
Adu05g01548 350 SUPERFAMILY Cyclin-like 168 282 IPR036915 -
Adu05g01548 350 Gene3D - 57 274 - -
Adu05g01548 350 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 324 - -
Adu05g01548 350 SUPERFAMILY Cyclin-like 46 183 IPR036915 -
Adu05g01548 350 SMART cyclin_7 89 177 IPR013763 -
Adu05g01548 350 Pfam Cyclin, N-terminal domain 57 183 IPR006671 -
Adu05g01548 350 Gene3D - 67 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01548 Adu-Chr5 26876653 26881209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01548 1 344 Core Cell Cycle Gene Families AT1G70210 60.632 1.97e-131 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01548 K18810 - gmx:100775224 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01548 05 26876653 26881209 Adu05g01548 05 26876653 26881209 ECH
Adu05g01548 05 26876653 26881209 Adu03g03807 03 126754314 126757269 PCT