Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu05g01548 | ATGTCGATCTCCTGCTCCGACTTCTTCTCTGACTCCGATCTTTTCTGCGCTGAGGACACCTCCGGAATCCTCTCCGAAGAGTCTCCGGAATCCTCTTCCTCCTTCTCCGACTTCGACTCATTATCTCCGCCGCTGCCGCCGATGGAGGAGGAGGAGTCCATAGCCGGATTCCTCGAAGACGAACAAAACTTCGTCCCTGGATTCGAGTATCTCACGAGGTTCCAATCTCACTCGCTGGATGCCTCCGCAAGAGAAGAATCCGTTGCCTGGATTCTCAAGGTGCAGGCTTACTACGGTTTTCAGCCGTTGACCGCGTATCTTTCCGTCAACTACATGGATCGATTCTTGAACTCTCGGCAGTTGCCGCAAACAAATGGGTGGCCGCTGCAACTTCTATCTATTGCATGCTTGTCTCTAGCGGCAAAGATGGAAGAGCCTCTTGTCCCTTCTCTCTTGGACCTTCAGGTAGAAGGTGCCAAATACATTTTTGAGCCCAGAACAATTCAAAGGATGGAGCTGCTTGTTCTGGGTGTCCTGGATTGGAGGCTAAGATCAGTCACCCCATTTAGCTTTCTCGGTTTCTTTGCTTGCAAGTTGGATTCAACTGGAACTTTTACTAGATTCCTCATTTCACGGGCTACACAAATCATATTATCCAATATCCAAGAGGCTAGCTTTCTTGCATACTGGCCATCATGCATTGCTGCTACGGCCATACTATGTGCAGCTAACGAAATTCCAAATTGGTCCCTCGTCAAGCCTGAGCATGCCGAATCCTGGTGCCAGGGGCTTAGAAAAGAGAAAATTAGAGGTTGCTACCAATTAATGCAAGAGCTACTTGTGATTGATAATAATCAGAGGAAGACTCCTAAGGTGTTACCACAGCTGCGAGTGATGACGACTCGGCCCCTAACGAGGTCAAGTGTCTCCTCATTCTTATCATCGTCGTCGTTGTCATCGTCTACTTCATCCTCTGCATTCTCATTGTCTTATAAAAGGAGGAAATTAAATAACTGTTTCTGGGTAGATGATCACAAAGGAAACGCCCCTTGA | 1053 | 0.4796 | MSISCSDFFSDSDLFCAEDTSGILSEESPESSSSFSDFDSLSPPLPPMEEEESIAGFLEDEQNFVPGFEYLTRFQSHSLDASAREESVAWILKVQAYYGFQPLTAYLSVNYMDRFLNSRQLPQTNGWPLQLLSIACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIQRMELLVLGVLDWRLRSVTPFSFLGFFACKLDSTGTFTRFLISRATQIILSNIQEASFLAYWPSCIAATAILCAANEIPNWSLVKPEHAESWCQGLRKEKIRGCYQLMQELLVIDNNQRKTPKVLPQLRVMTTRPLTRSSVSSFLSSSSLSSSTSSSAFSLSYKRRKLNNCFWVDDHKGNAP | 350 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu05g01548 | 350 | CDD | CYCLIN | 90 | 176 | IPR013763 | - | |
Adu05g01548 | 350 | MobiDBLite | consensus disorder prediction | 24 | 40 | - | - | |
Adu05g01548 | 350 | MobiDBLite | consensus disorder prediction | 22 | 49 | - | - | |
Adu05g01548 | 350 | PANTHER | CYCLINS | 1 | 324 | IPR039361 | - | |
Adu05g01548 | 350 | SMART | Cyclin_C_2 | 186 | 321 | IPR004367 | - | |
Adu05g01548 | 350 | Pfam | Cyclin, C-terminal domain | 186 | 292 | IPR004367 | - | |
Adu05g01548 | 350 | ProSitePatterns | Cyclins signature. | 84 | 115 | IPR006671 | - | |
Adu05g01548 | 350 | SUPERFAMILY | Cyclin-like | 168 | 282 | IPR036915 | - | |
Adu05g01548 | 350 | Gene3D | - | 57 | 274 | - | - | |
Adu05g01548 | 350 | PANTHER | CARBOXY-TERMINAL DOMAIN CYCLIN | 1 | 324 | - | - | |
Adu05g01548 | 350 | SUPERFAMILY | Cyclin-like | 46 | 183 | IPR036915 | - | |
Adu05g01548 | 350 | SMART | cyclin_7 | 89 | 177 | IPR013763 | - | |
Adu05g01548 | 350 | Pfam | Cyclin, N-terminal domain | 57 | 183 | IPR006671 | - | |
Adu05g01548 | 350 | Gene3D | - | 67 | 184 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu05g01548 | Adu-Chr5 | 26876653 | 26881209 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu05g01548 | 1 | 344 | Core Cell Cycle Gene Families | AT1G70210 | 60.632 | 1.97e-131 | 377 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu05g01548 | K18810 | - | gmx:100775224 | 497.278 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu05g01548 | 05 | 26876653 | 26881209 | Adu05g01548 | 05 | 26876653 | 26881209 | ECH | |
Adu05g01548 | 05 | 26876653 | 26881209 | Adu03g03807 | 03 | 126754314 | 126757269 | PCT |