Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01545 ATGTTTCAAGTGTATGTTGATTTTTGGGAGATAGAGCCGTCGGATAGTGATTTTTTTGGAACAGACTCCGATGAGGAGTTTCCAAGAGGAGACGATCTAGATTTTTTAGACGACGATTTGGAGGCTAATGAAGATAACCCTCAAGATAAGAGAATAGCAGAGTTGTCACGAGAAGATATCATGCAACTTCAGTTTACAGATGAGGAAGTTGTTTTTCGATTCTACAAGACTTATGCAATGATGCACCGTTTTGCTGTGAGGTTGGATGAAGTCAGACGCGATAGTGATGGTTGCGTAATTATGCGCCAAATTGTTTTTAGTCGGGCGGGCACAAAAAAGGAAGAGGTTGAAAAGGACAAAAGAATCAGGGACCACCGACCCCTAACTCGAAGTTGTTGCTGGGCAAGAATTCGTGCAAGACTAGATAGAAAAATTCATAAATGGAAGGTTGTTTCATTCTACAAAGAACACTCTCATGGCTTAGTTGATCCACTAGACGTTAGCATGATGCCTGAGTTGATGGATGTTGCATGTAAGAACTCAAGTGATTTTGTCAAAGCAATGAATGATGTTGTCAACACAATTACAAAACTCCAAAAGCGAGGTGAAAATTCATGCAACGGTAATTTAGACAATGACTACATTGTTGACCTATTGGTGGTGAAGAGTAAAGGAGCTCCCAAGAAAAACTCAAAATTTAAGCAACAGAGAAGGTGTTCAAACTGCGGTATGACAAGGCACTACAACAAAAATTGTCCTAATGTTCCTGGTAGAATCCCAAAGGAGCCGGTAGATGATGATACAGAAAAGAATATCAGCAGCCATCCTGACATCCTCACTAAGCACAAAAGACATGACAGTGTGAAAAATCAGCAGAAGATGGAAAAAGATAGGAGCATTGGTGGTGGAACAGCACCAACCTCAACAGCTAAATTGGCTTTTACTAATCAAGTGAAAATATCAAGCCCTGGTTCCGATATCCCAGTTTGTGCATCTACAAGTAACAAAGAGTCCGGGATGAGTTCCAGACCAGGTGAGTCTCCTGTTGTGGGCCTTGAAACTGGAATGGCAGATGAAGATTATTCAGATTTTGGGATGATTGACTGCTATGCATCTTCACACTCACTTTCACTCGACGATCCAAACTTTGCTTCTACGTTGTGGAATTTGTTATTTTTCATGGATATCAACATGTGA 1197 0.4077 MFQVYVDFWEIEPSDSDFFGTDSDEEFPRGDDLDFLDDDLEANEDNPQDKRIAELSREDIMQLQFTDEEVVFRFYKTYAMMHRFAVRLDEVRRDSDGCVIMRQIVFSRAGTKKEEVEKDKRIRDHRPLTRSCCWARIRARLDRKIHKWKVVSFYKEHSHGLVDPLDVSMMPELMDVACKNSSDFVKAMNDVVNTITKLQKRGENSCNGNLDNDYIVDLLVVKSKGAPKKNSKFKQQRRCSNCGMTRHYNKNCPNVPGRIPKEPVDDDTEKNISSHPDILTKHKRHDSVKNQQKMEKDRSIGGGTAPTSTAKLAFTNQVKISSPGSDIPVCASTSNKESGMSSRPGESPVVGLETGMADEDYSDFGMIDCYASSHSLSLDDPNFASTLWNLLFFMDINM 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01545 398 MobiDBLite consensus disorder prediction 325 342 - -
Adu05g01545 398 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 47 172 - -
Adu05g01545 398 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 47 172 - -
Adu05g01545 398 MobiDBLite consensus disorder prediction 260 296 - -
Adu05g01545 398 Pfam FAR1 DNA-binding domain 73 162 IPR004330 -
Adu05g01545 398 MobiDBLite consensus disorder prediction 253 308 - -
Adu05g01545 398 ProSiteProfiles Zinc finger CCHC-type profile. 237 254 IPR001878 GO:0003676|GO:0008270
Adu05g01545 398 MobiDBLite consensus disorder prediction 325 348 - -
Adu05g01545 398 SUPERFAMILY Retrovirus zinc finger-like domains 225 260 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01545 Adu-Chr5 26559864 26565912 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu05g01545 FAR1 3.8e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01545 - K17604 aip:107641230 293.893